myRT

myRT report for GCA_005049035.1_ASM504903v1

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Seq: SUNG01000066.1 Pseudomonas aeruginosa strain Pyo5 Pyo5_S67_R1__paired__contig_66, whole genome shotgun sequence (20312 bp)
Overview 1 RT 1: 148-6396 bp Neighborhood of RT #1 [148, 6572] EAL IS5 RVT_N RVT-GII GIIM RVT-GII GIIM DUF772 Feature: gene Location: 148-891 bp Feature: domain Description: EAL Location: 208-868 bp Feature: domain Description: EAL Location: 208-868 bp Feature: gene Location: 1560-2018 bp Feature: domain Description: IS5 Location: 1566-1992 bp Feature: domain Description: IS5 Location: 1 566-1 992 bp Feature: gene Location: 2091-3596 bp Feature: RT Description: RVT_N Location: 2172-2397 bp Feature: RT Description: RVT_N Location: 21 72-2397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2448-3090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2448-3090 bp Feature: domain Description: GIIM Note: maturase Location: 3141-3375 bp Feature: domain Description: GIIM Note: maturase Location: 31 41 -3375 bp Feature: gene Location: 4272-5540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4485-5142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4485-51 42 bp Feature: domain Description: GIIM Note: maturase Location: 5220-5442 bp Feature: domain Description: GIIM Note: maturase Location: 5220-5442 bp Feature: gene Location: 5929-6024 bp Feature: gene Location: 6060-6572 bp Feature: domain Description: DUF772 Location: 6210-6396 bp Feature: domain Description: DUF772 Location: 621 0-6396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), IS5 (COG3039), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)