myRT

myRT report for GCA_005116575.1_ASM511657v1

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Seq: SWCN01000010.1 Desulforhopalus sp. IMCC35007 NODE_10_length_179798_cov_77.887906, whole genome shotgun sequence (179798 bp)
Overview 1 RT 1: 115346-127101 bp Neighborhood of RT #1 [115346, 128306] COG5340 AbiEii RVT-UG1 DEXDc_RapA PRK04914 YeeA N6_Mtase Feature: gene Location: 115346-116152 bp Feature: domain Description: COG5340 Location: 115469-116120 bp Feature: domain Description: COG5340 Location: 1 1 5469-1 1 61 20 bp Feature: gene Location: 116149-117117 bp Feature: domain Description: AbiEii Location: 116245-116878 bp Feature: domain Description: AbiEii Location: 1 1 6245-1 1 6878 bp Feature: gene Location: 117429-121271 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 118155-118647 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 1 81 55-1 1 8647 bp Feature: gene Location: 121276-124341 bp Feature: domain Description: DEXDc_RapA Location: 121621-122278 bp Feature: domain Description: DEXDc_RapA Location: 1 21 621 -1 22278 bp Feature: domain Description: PRK04914 Location: 122701-123724 bp Feature: domain Description: PRK0491 4 Location: 1 22701 -1 23724 bp Feature: gene Location: 124341-128306 bp Feature: domain Description: YeeA Location: 126078-126486 bp Feature: domain Description: YeeA Location: 1 26078-1 26486 bp Feature: domain Description: N6_Mtase Location: 126897-127101 bp Feature: domain Description: N6_Mtase Location: 1 26897-1 271 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-UG1, DEXDc_RapA (cd18011), PRK04914 (RNA polymerase-associated protein RapA), YeeA (COG1002), N6_Mtase (pfam02384)

Seq: SWCN01000001.1 Desulforhopalus sp. IMCC35007 NODE_1_length_433534_cov_77.393609, whole genome shotgun sequence (433534 bp)
Overview 1 RT 1: 427249-432281 bp Neighborhood of RT #1 [427249, 432281] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 427249-427461 bp Feature: gene Location: 427839-428105 bp Feature: gene Location: 428239-429600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428533-429157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 8533-42 9157 bp Feature: domain Description: GIIM Note: maturase Location: 429259-429469 bp Feature: domain Description: GIIM Note: maturase Location: 42 92 59-42 9469 bp Feature: gene Location: 429973-431277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 430225-430843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4302 2 5-430843 bp Feature: domain Description: GIIM Note: maturase Location: 430888-431116 bp Feature: domain Description: GIIM Note: maturase Location: 430888-431116 bp Feature: gene Location: 431632-431772 bp Feature: gene Location: 432099-432281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SWCN01000003.1 Desulforhopalus sp. IMCC35007 NODE_3_length_372496_cov_75.355183, whole genome shotgun sequence (372496 bp)
Overview 1 RT 1: 84365-90336 bp Neighborhood of RT #1 [84365, 90404] RVT-GII GIIM RVT-GII GGDEF Feature: gene Location: 84365-84703 bp Feature: gene Location: 84690-85196 bp Feature: gene Location: 85286-86650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85586-86204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85586-86204 bp Feature: domain Description: GIIM Note: maturase Location: 86246-86456 bp Feature: domain Description: GIIM Note: maturase Location: 86246-86456 bp Feature: gene Location: 87095-87235 bp Feature: gene Location: 87282-87476 bp Feature: gene Location: 87659-88963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87941-88610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87941-88610 bp Feature: gene Location: 89091-89408 bp Feature: gene Location: 89508-90404 bp Feature: domain Description: GGDEF Location: 89877-90336 bp Feature: domain Description: GGDEF Location: 89877-903 3 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GGDEF (TIGR00254)

Seq: SWCN01000009.1 Desulforhopalus sp. IMCC35007 NODE_9_length_204064_cov_76.165075, whole genome shotgun sequence (204064 bp)
Overview 1 RT 1: 121897-127207 bp Neighborhood of RT #1 [121897, 127207] eubact_ribD nrdR RVT-GII GIIM RVT-GII GIIM RVT-GII group_II_RT_mat Feature: gene Location: 121897-123003 bp Feature: domain Description: eubact_ribD Location: 121918-122968 bp Feature: domain Description: eubact_ribD Location: 121918-122968 bp Feature: gene Location: 123003-123473 bp Feature: domain Description: nrdR Location: 123006-123453 bp Feature: domain Description: nrdR Location: 123006-1234 53 bp Feature: gene Location: 123665-124357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123779-123926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123779-123926 bp Feature: domain Description: GIIM Note: maturase Location: 123968-124196 bp Feature: domain Description: GIIM Note: maturase Location: 123968-124 196 bp Feature: gene Location: 124317-125735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124692-125349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124 692-12534 9 bp Feature: domain Description: GIIM Note: maturase Location: 125430-125649 bp Feature: domain Description: GIIM Note: maturase Location: 1254 30-12564 9 bp Feature: gene Location: 125533-126006 bp Feature: gene Location: 126056-126562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126059-126512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126059-126512 bp Feature: gene Location: 126575-126838 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 126659-126836 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 126659-126836 bp Feature: gene Location: 126896-127207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eubact_ribD (TIGR00326), nrdR (PRK00464), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)