myRT

myRT report for GCA_005144565.1_ASM514456v1

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Seq: SWDX01000002.1 Pedobacter sp. RP-1-16 contig2, whole genome shotgun sequence (892559 bp)
Overview 1 RT 1: 52397-55217 bp Neighborhood of RT #1 [52397, 55217] DUF3347 RVT-G2Lc Feature: gene Location: 52397-52972 bp Feature: domain Description: DUF3347 Location: 52442-52958 bp Feature: domain Description: DUF3347 Location: 52442-52958 bp Feature: gene Location: 53008-53217 bp Feature: gene Location: 53236-54360 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 53464-54151 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 53464-541 51 bp Feature: gene Location: 54594-54851 bp Feature: gene Location: 54966-55217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3347 (pfam11827), RVT-G2Lc

Seq: SWDX01000029.1 Pedobacter sp. RP-1-16 contig29, whole genome shotgun sequence (1926 bp)
Overview 1 RT 1: 162-1670 bp Neighborhood of RT #1 [162, 1846] RVT-GII GIIM Feature: gene Location: 162-395 bp Feature: gene Location: 581-1846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779-1397 bp Feature: domain Description: GIIM Note: maturase Location: 1460-1670 bp Feature: domain Description: GIIM Note: maturase Location: 1460-1670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SWDX01000007.1 Pedobacter sp. RP-1-16 contig7, whole genome shotgun sequence (298711 bp)
Overview 1 RT 1: 145183-155123 bp Neighborhood of RT #1 [145183, 155878] RVT-UG5 RVT-G2Lc GIIM KAP_NTPase Feature: gene Location: 145183-145506 bp Feature: gene Location: 145522-146016 bp Feature: gene Location: 146494-149784 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 147004-147532 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 147004-14753 2 bp Feature: gene Location: 149788-150450 bp Feature: gene Location: 150702-151001 bp Feature: gene Location: 151204-152571 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 151498-152164 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 151498-152164 bp Feature: domain Description: GIIM Note: maturase Location: 152260-152416 bp Feature: domain Description: GIIM Note: maturase Location: 152260-152416 bp Feature: gene Location: 152750-152980 bp Feature: gene Location: 154034-155878 bp Feature: domain Description: KAP_NTPase Location: 154097-155123 bp Feature: domain Description: KAP_NTPase Location: 154097-155123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, RVT-G2Lc, GIIM (pfam08388), KAP_NTPase (pfam07693)