myRT

myRT report for GCA_005144635.1_ASM514463v1

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Seq: SSMR01000007.1 Polyangium sp. SDU3-1 Scaffold7_1, whole genome shotgun sequence (552308 bp)
Overview 1 RT 1: 430840-440139 bp Neighborhood of RT #1 [430840, 440162] SWIM RVT-Retrons NorB CBS_pair_AcuB_like CBS_pair_AcuB_like Feature: gene Location: 430840-432546 bp Feature: gene Location: 432543-434648 bp Feature: domain Description: SWIM Location: 434154-434238 bp Feature: domain Description: SWIM Location: 4341 54-434238 bp Feature: gene Location: 434955-436661 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 435798-436434 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 435798-436434 bp Feature: gene Location: 436827-439211 bp Feature: domain Description: NorB Location: 436863-439062 bp Feature: domain Description: NorB Location: 436863-439062 bp Feature: gene Location: 439305-440162 bp Feature: domain Description: CBS_pair_AcuB_like Location: 439362-439701 bp Feature: domain Description: CBS_pair_AcuB_like Location: 439362-439701 bp Feature: domain Description: CBS_pair_AcuB_like Location: 439764-440139 bp Feature: domain Description: CBS_pair_AcuB_like Location: 439764-4401 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, NorB (COG3256), CBS_pair_AcuB_like (cd04584)

Seq: SSMR01000009.1 Polyangium sp. SDU3-1 Scaffold9_1, whole genome shotgun sequence (479265 bp)
Overview 1 RT 1: 127148-134270 bp Neighborhood of RT #1 [127148, 134270] HEAT_2 HEAT_2 HEAT_2 HEAT_2 Tas HEAT_2 RVT-Retrons Feature: gene Location: 127148-127528 bp Feature: gene Location: 127653-130568 bp Feature: domain Description: HEAT_2 Location: 127683-127878 bp Feature: domain Description: HEAT_2 Location: 12 7683-12 7878 bp Feature: domain Description: HEAT_2 Location: 127983-128202 bp Feature: domain Description: HEAT_2 Location: 12 7983-12 82 02 bp Feature: domain Description: HEAT_2 Location: 128568-128787 bp Feature: domain Description: HEAT_2 Location: 12 8568-12 8787 bp Feature: domain Description: HEAT_2 Location: 129114-129357 bp Feature: domain Description: HEAT_2 Location: 12 9114-12 9357 bp Feature: domain Description: Tas Location: 129684-130272 bp Feature: domain Description: Tas Location: 12 9684-1302 72 bp Feature: domain Description: HEAT_2 Location: 130344-130545 bp Feature: domain Description: HEAT_2 Location: 130344-130545 bp Feature: gene Location: 130766-132172 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131351-131933 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131351-131933 bp Feature: gene Location: 132313-133569 bp Feature: gene Location: 133647-134270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), Tas (COG0667), RVT-Retrons