myRT

myRT report for GCA_005146185.1_ASM514618v1

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Seq: SWMM01000002.1 Klebsiella pneumoniae strain SIKP108 117_NODE_2, whole genome shotgun sequence (316035 bp)
Overview 1 RT 1: 29-2869 bp Neighborhood of RT #1 [29, 2871] RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 29-832 bp Ori: TKE41140.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 197-653 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 97-653 bp Feature: gene Location: 1033-1701 bp Ori: TKE41141.1 Feature: domain Description: PRK09951 Location: 1036-1699 bp Feature: domain Description: PRK09951 Location: 1 036-1 699 bp Feature: gene Location: 1906-2871 bp Ori: TKE41142.1 Gene: sapB Feature: domain Description: PRK15110 Location: 1909-2869 bp Feature: domain Description: PRK1 51 1 0 Location: 1 909-2869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: SWMM01000003.1 Klebsiella pneumoniae strain SIKP108 117_NODE_3, whole genome shotgun sequence (252141 bp)
Overview 1 RT 1: 163977-169930 bp Neighborhood of RT #1 [163977, 170106] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 163977-164207 bp Feature: gene Location: 165120-167366 bp Ori: TKE40964.1 Feature: domain Description: AAA_15 Location: 165123-166131 bp Feature: domain Description: AAA_15 Location: 16512 3-166131 bp Feature: gene Location: 167481-168581 bp Ori: TKE40965.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 167661-168195 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 167661-168195 bp Feature: gene Location: 169062-169217 bp Feature: gene Location: 169237-170106 bp Ori: TKE40966.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 169759-169930 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 169759-169930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: SWMM01000001.1 Klebsiella pneumoniae strain SIKP108 117_NODE_1, whole genome shotgun sequence (319180 bp)
Overview 1 RT 1: 161412-164470 bp Neighborhood of RT #1 [161412, 164472] RVT-Retrons HTH_XRE DinI Feature: gene Location: 161412-161606 bp Feature: gene Location: 161605-162036 bp Feature: gene Location: 162175-163125 bp Ori: TKE41874.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162355-162898 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1623 55-162898 bp Feature: gene Location: 163103-163411 bp Ori: TKE41875.1 Feature: domain Description: HTH_XRE Location: 163115-163280 bp Feature: domain Description: HTH_XRE Location: 163 115-163 280 bp Feature: gene Location: 164032-164472 bp Ori: TKE41876.1 Feature: domain Description: DinI Location: 164287-164470 bp Feature: domain Description: DinI Location: 164287-164470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DinI (pfam06183)

Seq: SWMM01000074.1 Klebsiella pneumoniae strain SIKP108 117_NODE_74, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1834] RVT-GII Feature: gene Location: 1-217 bp Feature: gene Location: 350-1834 bp Ori: TKE31772.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII