myRT

myRT report for GCA_005146375.1_ASM514637v1

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Seq: SYVA01000122.1 Vibrio sp. F13 strain 10N.222.55.E10 10N.222.55.E10_contig_121, whole genome shotgun sequence (5829 bp)
Overview 1 RT 1: 2581-5744 bp Neighborhood of RT #1 [2581, 5827] SSL2 RVT_N RVT-GII Feature: gene Location: 2581-3960 bp Feature: domain Description: SSL2 Location: 2587-3814 bp Feature: domain Description: SSL2 Location: 2587-381 4 bp Feature: gene Location: 4481-4624 bp Feature: gene Location: 4859-5827 bp Feature: domain Description: RVT_N Location: 4907-5150 bp Feature: domain Description: RVT_N Location: 4907-51 50 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5195-5744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 95-5744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT_N (pfam13655), RVT-GII

Seq: SYVA01000123.1 Vibrio sp. F13 strain 10N.222.55.E10 10N.222.55.E10_contig_122, whole genome shotgun sequence (1789 bp)
Overview 1 RT 1: 3-1421 bp Neighborhood of RT #1 [3, 1421] RVT_N RVT-GII Feature: gene Location: 3-1202 bp Feature: domain Description: RVT_N Location: 210-453 bp Feature: domain Description: RVT_N Location: 2 10-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-112 5 bp Feature: gene Location: 1278-1421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: SYVA01000056.1 Vibrio sp. F13 strain 10N.222.55.E10 10N.222.55.E10_contig_55, whole genome shotgun sequence (43460 bp)
Overview 1 RT 1: 516-6166 bp Neighborhood of RT #1 [516, 6166] RVT-UG4 Feature: gene Location: 516-1016 bp Feature: gene Location: 1291-2268 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1651-2104 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1651-2104 bp Feature: gene Location: 2404-5259 bp Feature: gene Location: 5708-6166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: SYVA01000072.1 Vibrio sp. F13 strain 10N.222.55.E10 10N.222.55.E10_contig_71, whole genome shotgun sequence (75658 bp)
Overview 1 RT 1: 63482-70567 bp Neighborhood of RT #1 [63482, 70567] RVT-GII Feature: gene Location: 63482-63727 bp Feature: gene Location: 63752-63928 bp Feature: gene Location: 64059-64259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64101-64251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 101-64 251 bp Feature: gene Location: 64237-66408 bp Feature: gene Location: 66410-70567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SYVA01000093.1 Vibrio sp. F13 strain 10N.222.55.E10 10N.222.55.E10_contig_92, whole genome shotgun sequence (2564 bp)
Overview 1 RT 1: 172-2301 bp Neighborhood of RT #1 [172, 2525] RVT-GII RVT-GII GIIM Feature: gene Location: 172-303 bp Feature: gene Location: 582-2525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 732-1182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 732-1182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1839-2043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1839-2043 bp Feature: domain Description: GIIM Note: maturase Location: 2097-2301 bp Feature: domain Description: GIIM Note: maturase Location: 2097-2301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)