myRT

myRT report for GCA_005146485.1_ASM514648v1

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Seq: SYVD01000137.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_136, whole genome shotgun sequence (1968 bp)
Overview 1 RT 1: 2-1889 bp Neighborhood of RT #1 [2, 1966] RVT_N RVT-GII Feature: gene Location: 2-289 bp Feature: gene Location: 548-691 bp Feature: gene Location: 926-1966 bp Feature: RT Description: RVT_N Location: 974-1217 bp Feature: RT Description: RVT_N Location: 974-1 21 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262-1889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 262-1 889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: SYVD01000037.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_36, whole genome shotgun sequence (20536 bp)
Overview 1 RT 1: 1-3227 bp Neighborhood of RT #1 [1, 3227] RVT-GII GIIM PRK10664 Feature: gene Location: 1-1242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 0-832 bp Feature: domain Description: GIIM Note: maturase Location: 886-1090 bp Feature: domain Description: GIIM Note: maturase Location: 886-1090 bp Feature: gene Location: 2783-3058 bp Feature: domain Description: PRK10664 Location: 2786-3053 bp Feature: domain Description: PRK10664 Location: 2 786-3053 bp Feature: gene Location: 3084-3227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK10664 (DNA-binding protein HU-beta)

Seq: SYVD01000041.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_40, whole genome shotgun sequence (53709 bp)
Overview 1 RT 1: 1-1529 bp Neighborhood of RT #1 [1, 1529] RVT-GII GIIM Feature: gene Location: 1-864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-3 82 bp Feature: domain Description: GIIM Note: maturase Location: 436-637 bp Feature: domain Description: GIIM Note: maturase Location: 43 6-63 7 bp Feature: gene Location: 1007-1243 bp Feature: gene Location: 1323-1529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SYVD01000068.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_67, whole genome shotgun sequence (75658 bp)
Overview 1 RT 1: 63482-70567 bp Neighborhood of RT #1 [63482, 70567] RVT-GII Feature: gene Location: 63482-63727 bp Feature: gene Location: 63752-63928 bp Feature: gene Location: 64059-64259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64101-64251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 101-64 251 bp Feature: gene Location: 64237-66408 bp Feature: gene Location: 66410-70567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SYVD01000075.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_74, whole genome shotgun sequence (2281 bp)
Overview 1 RT 1: 152-2279 bp Neighborhood of RT #1 [152, 2278] group_II_RT_mat RVT-GII Feature: gene Location: 152-2278 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 932-1061 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 932-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-2279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185 3-2279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII

Seq: SYVD01000096.1 Vibrio sp. F13 strain 10N.222.55.A2 10N.222.55.A2_contig_95, whole genome shotgun sequence (5829 bp)
Overview 1 RT 1: 3-3103 bp Neighborhood of RT #1 [3, 3249] RVT_N RVT-GII SSL2 Feature: gene Location: 3-1130 bp Feature: RT Description: RVT_N Location: 210-453 bp Feature: RT Description: RVT_N Location: 210-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1047 bp Feature: gene Location: 1206-1349 bp Feature: gene Location: 1870-3249 bp Feature: domain Description: SSL2 Location: 1876-3103 bp Feature: domain Description: SSL2 Location: 1876 -3103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT_N (pfam13655), RVT-GII