myRT

myRT report for GCA_005146525.1_ASM514652v1

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Seq: SYVE01000121.1 Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_120, whole genome shotgun sequence (1659 bp)
Overview 1 RT 1: 1-1580 bp Neighborhood of RT #1 [1, 1657] RVT_N RVT-GII Feature: gene Location: 1-147 bp Feature: gene Location: 239-382 bp Feature: gene Location: 617-1657 bp Feature: domain Description: RVT_N Location: 665-908 bp Feature: domain Description: RVT_N Location: 665-908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953-1 580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: SYVE01000020.1 Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_19, whole genome shotgun sequence (1136 bp)
Overview 1 RT 1: 42-1136 bp Neighborhood of RT #1 [42, 1135] RVT-GII Feature: gene Location: 42-173 bp Feature: gene Location: 383-1135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602-1136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602 -1136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SYVE01000021.1 Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_20, whole genome shotgun sequence (1812 bp)
Overview 1 RT 1: 202-1632 bp Neighborhood of RT #1 [202, 1811] RVT-GII GIIM Feature: gene Location: 202-333 bp Feature: gene Location: 543-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-13 74 bp Feature: domain Description: GIIM Note: maturase Location: 1428-1632 bp Feature: domain Description: GIIM Note: maturase Location: 1428-163 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SYVE01000073.1 Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_72, whole genome shotgun sequence (40794 bp)
Overview 1 RT 1: 34734-40717 bp Neighborhood of RT #1 [34734, 40773] RVT-UG4 rve_3 Feature: gene Location: 34734-35084 bp Feature: gene Location: 35533-38388 bp Feature: gene Location: 38524-39501 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38884-39337 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38884 -39337 bp Feature: gene Location: 39776-40276 bp Feature: gene Location: 40594-40773 bp Feature: domain Description: rve_3 Location: 40633-40717 bp Feature: domain Description: rve_3 Location: 4 0633-4 0717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, rve_3 (pfam13683)

Seq: SYVE01000080.1 Vibrio sp. F13 strain 10N.222.55.A11 10N.222.55.A11_contig_79, whole genome shotgun sequence (25797 bp)
Overview 1 RT 1: 3-3103 bp Neighborhood of RT #1 [3, 3249] RVT_N RVT-GII SSL2 Feature: gene Location: 3-1130 bp Feature: domain Description: RVT_N Location: 210-453 bp Feature: domain Description: RVT_N Location: 210-45 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 498-1047 bp Feature: gene Location: 1206-1349 bp Feature: gene Location: 1870-3249 bp Feature: domain Description: SSL2 Location: 1876-3103 bp Feature: domain Description: SSL2 Location: 1876-3103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, SSL2 (COG1061)