myRT

myRT report for GCA_005146635.1_ASM514663v1

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Seq: SYWA01000044.1 Vibrio tasmaniensis strain 10N.222.45.A1 10N.222.45.A1_contig_43, whole genome shotgun sequence (11534 bp)
Overview 1 RT 1: 3190-10544 bp Neighborhood of RT #1 [3190, 10544] PRK10795 RVT_N RVT-GII GIIM HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 3190-5052 bp Feature: domain Description: PRK10795 Location: 3193-5041 bp Feature: domain Description: PRK1 0795 Location: 31 93-5041 bp Feature: gene Location: 5590-5847 bp Feature: gene Location: 5911-7524 bp Feature: RT Description: RVT_N Location: 6118-6361 bp Feature: RT Description: RVT_N Location: 61 1 8-6361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6406-7033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6406-7033 bp Feature: domain Description: GIIM Note: maturase Location: 7090-7318 bp Feature: domain Description: GIIM Note: maturase Location: 7090-731 8 bp Feature: gene Location: 8374-9612 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8638-8782 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 8638-8782 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 8842-9553 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 8842-9553 bp Feature: gene Location: 9759-10544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10795 (penicillin-binding protein 2; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)

Seq: SYWA01000067.1 Vibrio tasmaniensis strain 10N.222.45.A1 10N.222.45.A1_contig_66, whole genome shotgun sequence (34005 bp)
Overview 1 RT 1: 2963-13115 bp Neighborhood of RT #1 [2963, 13115] Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 DUF4144 RVT-GII Feature: gene Location: 2963-9982 bp Feature: domain Description: Laminin_G_3 Location: 3815-4217 bp Feature: domain Description: Laminin_G_3 Location: 3815-42 17 bp Feature: domain Description: Laminin_G_3 Location: 4724-5162 bp Feature: domain Description: Laminin_G_3 Location: 472 4-5162 bp Feature: domain Description: Laminin_G_3 Location: 5705-6101 bp Feature: domain Description: Laminin_G_3 Location: 5705-6101 bp Feature: domain Description: Laminin_G_3 Location: 6656-7058 bp Feature: domain Description: Laminin_G_3 Location: 6656-7058 bp Feature: domain Description: Laminin_G_3 Location: 7562-7979 bp Feature: domain Description: Laminin_G_3 Location: 7562 -7979 bp Feature: domain Description: Laminin_G_3 Location: 8498-8906 bp Feature: domain Description: Laminin_G_3 Location: 8498-8906 bp Feature: domain Description: Laminin_G_3 Location: 9449-9815 bp Feature: domain Description: Laminin_G_3 Location: 9449-9815 bp Feature: gene Location: 10245-10568 bp Feature: domain Description: DUF4144 Location: 10257-10551 bp Feature: domain Description: DUF4144 Location: 102 57-10551 bp Feature: gene Location: 10764-11018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10773-11001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10773-11001 bp Feature: gene Location: 11046-12878 bp Feature: gene Location: 12882-13115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4144 (pfam13642), RVT-GII, Laminin_G_3 (pfam13385)