myRT

myRT report for GCA_005146675.1_ASM514667v1

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Seq: SYVU01000030.1 Vibrio tasmaniensis strain 10N.222.45.E7 10N.222.45.E7_contig_29, whole genome shotgun sequence (13560 bp)
Overview 1 RT 1: 1-8747 bp Neighborhood of RT #1 [1, 8914] RVT-GII DUF4144 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Feature: gene Location: 1-831 bp Feature: gene Location: 859-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 868-1 096 bp Feature: gene Location: 1309-1632 bp Feature: domain Description: DUF4144 Location: 1321-1615 bp Feature: domain Description: DUF41 44 Location: 1 321 -1 61 5 bp Feature: gene Location: 1895-8914 bp Feature: domain Description: Laminin_G_3 Location: 2747-3149 bp Feature: domain Description: Laminin_G_3 Location: 2747-31 49 bp Feature: domain Description: Laminin_G_3 Location: 3656-4094 bp Feature: domain Description: Laminin_G_3 Location: 3656-4094 bp Feature: domain Description: Laminin_G_3 Location: 4637-5033 bp Feature: domain Description: Laminin_G_3 Location: 4637-5033 bp Feature: domain Description: Laminin_G_3 Location: 5588-5990 bp Feature: domain Description: Laminin_G_3 Location: 5588-5990 bp Feature: domain Description: Laminin_G_3 Location: 6494-6911 bp Feature: domain Description: Laminin_G_3 Location: 6494-691 1 bp Feature: domain Description: Laminin_G_3 Location: 7430-7838 bp Feature: domain Description: Laminin_G_3 Location: 7430-7838 bp Feature: domain Description: Laminin_G_3 Location: 8381-8747 bp Feature: domain Description: Laminin_G_3 Location: 8381 -8747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4144 (pfam13642), Laminin_G_3 (pfam13385), RVT-GII

Seq: SYVU01000081.1 Vibrio tasmaniensis strain 10N.222.45.E7 10N.222.45.E7_contig_80, whole genome shotgun sequence (12221 bp)
Overview 1 RT 1: 3877-11231 bp Neighborhood of RT #1 [3877, 11231] PRK10795 RVT_N RVT-GII GIIM HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 3877-5739 bp Feature: domain Description: PRK10795 Location: 3880-5728 bp Feature: domain Description: PRK10795 Location: 3880-572 8 bp Feature: gene Location: 6277-6534 bp Feature: gene Location: 6598-8211 bp Feature: RT Description: RVT_N Location: 6805-7048 bp Feature: RT Description: RVT_N Location: 6805-7048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7093-7720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7093-772 0 bp Feature: domain Description: GIIM Note: maturase Location: 7777-8005 bp Feature: domain Description: GIIM Note: maturase Location: 7777-8005 bp Feature: gene Location: 9061-10299 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 9325-9469 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 932 5-9469 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 9529-10240 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 952 9-102 40 bp Feature: gene Location: 10446-11231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10795 (penicillin-binding protein 2; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)