myRT

myRT report for GCA_005146695.1_ASM514669v1

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Seq: SYVJ01000022.1 Vibrio sp. F13 strain 10N.222.49.B9 10N.222.49.B9_contig_21, whole genome shotgun sequence (7703 bp)
Overview 1 RT 1: 4638-7271 bp Neighborhood of RT #1 [4638, 7495] RVT_N RVT-GII GIIM Feature: gene Location: 4638-5528 bp Feature: gene Location: 5595-5801 bp Feature: gene Location: 5981-7495 bp Feature: RT Description: RVT_N Location: 6071-6314 bp Feature: RT Description: RVT_N Location: 6071 -631 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6359-6986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6359-6986 bp Feature: domain Description: GIIM Note: maturase Location: 7043-7271 bp Feature: domain Description: GIIM Note: maturase Location: 7043-7271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SYVJ01000004.1 Vibrio sp. F13 strain 10N.222.49.B9 10N.222.49.B9_contig_3, whole genome shotgun sequence (202221 bp)
Overview 1 RT 1: 100031-106286 bp Neighborhood of RT #1 [100031, 106312] AraJ RVT_N RVT-GII GIIM LysR YvrE Feature: gene Location: 100031-100327 bp Feature: gene Location: 100570-101739 bp Feature: domain Description: AraJ Location: 100576-101707 bp Feature: domain Description: AraJ Location: 100576-101707 bp Feature: gene Location: 102342-103973 bp Feature: RT Description: RVT_N Location: 102549-102792 bp Feature: RT Description: RVT_N Location: 102 549-102 792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102837-103464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 837-103464 bp Feature: domain Description: GIIM Note: maturase Location: 103524-103749 bp Feature: domain Description: GIIM Note: maturase Location: 10352 4-103749 bp Feature: gene Location: 104432-105340 bp Feature: domain Description: LysR Location: 104447-105317 bp Feature: domain Description: LysR Location: 104447-105317 bp Feature: gene Location: 105428-106312 bp Feature: domain Description: YvrE Location: 105506-106286 bp Feature: domain Description: YvrE Location: 105506-1062 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LysR (COG0583), YvrE (COG3386)

Seq: SYVJ01000061.1 Vibrio sp. F13 strain 10N.222.49.B9 10N.222.49.B9_contig_60, whole genome shotgun sequence (17153 bp)
Overview 1 RT 1: 234-4617 bp Neighborhood of RT #1 [234, 4617] COG3547 RVT_N RVT-GII GIIM DUF3577 Feature: gene Location: 234-1271 bp Feature: domain Description: COG3547 Location: 246-1218 bp Feature: domain Description: COG3 547 Location: 246-1218 bp Feature: gene Location: 1562-3034 bp Feature: RT Description: RVT_N Location: 1610-1853 bp Feature: RT Description: RVT_N Location: 1610-1853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2525 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2810 bp Feature: domain Description: GIIM Note: maturase Location: 2585-2810 bp Feature: gene Location: 3526-3969 bp Feature: domain Description: DUF3577 Location: 3541-3928 bp Feature: domain Description: DUF3 577 Location: 3 541-3 928 bp Feature: gene Location: 4093-4617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )