myRT

myRT report for GCA_005146875.1_ASM514687v1

Download annotations/find similar RTs

Seq: SYVZ01000071.1 Vibrio tasmaniensis strain 10N.222.45.A2 10N.222.45.A2_contig_70, whole genome shotgun sequence (12790 bp)
Overview 1 RT 1: 1923-8334 bp Neighborhood of RT #1 [1923, 8345] HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT_N RVT-GII GIIM PRK10795 Feature: gene Location: 1923-3161 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 2187-2331 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 21 87-2331 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2391-3102 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2391 -31 02 bp Feature: gene Location: 3904-4092 bp Feature: gene Location: 4170-5624 bp Feature: RT Description: RVT_N Location: 4218-4461 bp Feature: RT Description: RVT_N Location: 421 8-4461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4506-5133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4506-51 33 bp Feature: domain Description: GIIM Note: maturase Location: 5190-5418 bp Feature: domain Description: GIIM Note: maturase Location: 51 90-541 8 bp Feature: gene Location: 5688-5945 bp Feature: gene Location: 6483-8345 bp Feature: domain Description: PRK10795 Location: 6486-8334 bp Feature: domain Description: PRK1 0795 Location: 6486-8334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK10795 (penicillin-binding protein 2; Provisional)

Seq: SYVZ01000078.1 Vibrio tasmaniensis strain 10N.222.45.A2 10N.222.45.A2_contig_77, whole genome shotgun sequence (13560 bp)
Overview 1 RT 1: 4647-13557 bp Neighborhood of RT #1 [4647, 13557] Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 DUF4144 RVT-GII Feature: gene Location: 4647-11666 bp Feature: domain Description: Laminin_G_3 Location: 5499-5901 bp Feature: domain Description: Laminin_G_3 Location: 5499-5901 bp Feature: domain Description: Laminin_G_3 Location: 6408-6846 bp Feature: domain Description: Laminin_G_3 Location: 6408-6846 bp Feature: domain Description: Laminin_G_3 Location: 7389-7785 bp Feature: domain Description: Laminin_G_3 Location: 7389-7785 bp Feature: domain Description: Laminin_G_3 Location: 8340-8742 bp Feature: domain Description: Laminin_G_3 Location: 8340-8742 bp Feature: domain Description: Laminin_G_3 Location: 9246-9663 bp Feature: domain Description: Laminin_G_3 Location: 92 46-9663 bp Feature: domain Description: Laminin_G_3 Location: 10182-10590 bp Feature: domain Description: Laminin_G_3 Location: 10182 -10590 bp Feature: domain Description: Laminin_G_3 Location: 11133-11499 bp Feature: domain Description: Laminin_G_3 Location: 11133-11499 bp Feature: gene Location: 11929-12252 bp Feature: domain Description: DUF4144 Location: 11941-12235 bp Feature: domain Description: DUF4144 Location: 11941-12 2 35 bp Feature: gene Location: 12448-12702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12457-12685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 457-12 685 bp Feature: gene Location: 12730-13557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4144 (pfam13642), RVT-GII, Laminin_G_3 (pfam13385)