myRT

myRT report for GCA_005217165.1_ASM521716v1

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Seq: SZOL01000197.1 Bacillus wiedmannii strain I8 NODE_243_length_14870_cov_23.828514, whole genome shotgun sequence (14916 bp)
Overview 1 RT 1: 100-4244 bp Neighborhood of RT #1 [100, 4252] RVT-UG2 HsdM Feature: gene Location: 100-1539 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 352-1174 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 352-1 1 74 bp Feature: gene Location: 1804-2094 bp Feature: gene Location: 2771-4252 bp Feature: domain Description: HsdM Location: 2792-4244 bp Feature: domain Description: HsdM Location: 2792-4244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, HsdM (COG0286)

Seq: SZOL01000270.1 Bacillus wiedmannii strain I8 NODE_328_length_1753_cov_122.237305, whole genome shotgun sequence (1799 bp)
Overview 1 RT 1: 76-1648 bp Neighborhood of RT #1 [76, 1797] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 76-1797 bp Feature: domain Description: RVT_N Location: 79-262 bp Feature: domain Description: RVT_N Location: 79-2 62 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-988 bp Feature: domain Description: GIIM Note: maturase Location: 1048-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1048-12 82 bp Feature: domain Description: HNHc Note: nucleases Location: 1480-1648 bp Feature: domain Description: HNHc Note: nucleases Location: 1480-1648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: SZOL01000407.1 Bacillus wiedmannii strain I8 NODE_516_length_2951_cov_50.939003, whole genome shotgun sequence (2997 bp)
Overview 1 RT 1: 2-2680 bp Neighborhood of RT #1 [2, 2808] TQXA_dom RVT-GII HNHc Feature: gene Location: 2-367 bp Feature: domain Description: TQXA_dom Location: 266-350 bp Feature: domain Description: TQXA_dom Location: 266-3 50 bp Feature: gene Location: 943-2808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264-1990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264-1990 bp Feature: domain Description: HNHc Note: nucleases Location: 2542-2680 bp Feature: domain Description: HNHc Note: nucleases Location: 2542-2680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TQXA_dom (TIGR03934), RVT-GII, HNHc (smart00507)

Seq: SZOL01000055.1 Bacillus wiedmannii strain I8 NODE_59_length_6108_cov_49.112476, whole genome shotgun sequence (6154 bp)
Overview 1 RT 1: 3269-6095 bp Neighborhood of RT #1 [3269, 6106] 2A0309 spore_ger_x_C RVT-GII KOG4768 Feature: gene Location: 3269-4384 bp Feature: domain Description: 2A0309 Location: 3308-4367 bp Feature: domain Description: 2A0309 Location: 3308-4 367 bp Feature: gene Location: 4381-5496 bp Feature: domain Description: spore_ger_x_C Location: 4405-5491 bp Feature: domain Description: spore_ger_x_C Location: 4 4 05-54 91 bp Feature: gene Location: 5614-5811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5620-5767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5620-5767 bp Feature: gene Location: 5933-6106 bp Feature: domain Description: KOG4768 Location: 5951-6095 bp Feature: domain Description: KOG4 768 Location: 5951-6095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 2A0309 (TIGR00912), spore_ger_x_C (TIGR02887), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: SZOL01000076.1 Bacillus wiedmannii strain I8 NODE_83_length_16417_cov_84.054031, whole genome shotgun sequence (16463 bp)
Overview 1 RT 1: 3129-8180 bp Neighborhood of RT #1 [3129, 8180] RVT-GII HNHc Feature: gene Location: 3129-3392 bp Feature: gene Location: 4210-4455 bp Feature: gene Location: 4869-6665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5166-5859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 166-5 85 9 bp Feature: domain Description: HNHc Note: nucleases Location: 6417-6552 bp Feature: domain Description: HNHc Note: nucleases Location: 6417-65 5 2 bp Feature: gene Location: 7376-7978 bp Feature: gene Location: 8019-8180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)