myRT

myRT report for GCA_005217455.1_ASM521745v1

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Seq: SZPQ01000130.1 Biostraticola sp. BGMRC 2031 Scaffold122_1, whole genome shotgun sequence (1301 bp)
Overview 1 RT 1: 78-996 bp Neighborhood of RT #1 [78, 1037] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 78-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4-300 bp Feature: domain Description: Intron_maturas2 Location: 399-636 bp Feature: domain Description: Intron_maturas2 Location: 399-636 bp Feature: domain Description: HNHc Note: nucleases Location: 804-996 bp Feature: domain Description: HNHc Note: nucleases Location: 804-996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SZPQ01000023.1 Biostraticola sp. BGMRC 2031 Scaffold18_1, whole genome shotgun sequence (99670 bp)
Overview 1 RT 1: 97300-99669 bp Neighborhood of RT #1 [97300, 99669] antidote_CC2985 xerC RVT-GII Feature: gene Location: 97300-97563 bp Feature: domain Description: antidote_CC2985 Location: 97306-97510 bp Feature: domain Description: antidote_CC2 985 Location: 97306-97510 bp Feature: gene Location: 97630-98262 bp Feature: domain Description: xerC Location: 97636-98245 bp Feature: domain Description: xerC Location: 97636-982 45 bp Feature: gene Location: 98265-98969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98571-98961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98571-98961 bp Feature: gene Location: 99496-99669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT antidote_CC2985 (TIGR02606), xerC (PRK01287), RVT-GII

Seq: SZPQ01000005.1 Biostraticola sp. BGMRC 2031 Scaffold4_2, whole genome shotgun sequence (19099 bp)
Overview 1 RT 1: 3-4368 bp Neighborhood of RT #1 [3, 4442] RVT-AbiP2 Peptidases_S8_Subtilisin_like_2 KOG0730 Feature: gene Location: 3-683 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 420-684 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 420-684 bp Feature: gene Location: 1010-3430 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 1778-2720 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 1778-2720 bp Feature: gene Location: 3456-4442 bp Feature: domain Description: KOG0730 Location: 3582-4368 bp Feature: domain Description: KOG073 0 Location: 3 582-43 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Peptidases_S8_Subtilisin_like_2 (cd04847), KOG0730 (KOG0730, AAA+-type ATPase )