myRT

myRT report for GCA_005217845.1_ASM521784v1

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Seq: SZPU01000144.1 Lysinibacillus mangiferihumi strain CCTCC AB 2010389 contig_125__1..58410_, whole genome shotgun sequence (58410 bp)
Overview 1 RT 1: 18570-26088 bp Neighborhood of RT #1 [18570, 26093] PcrB_like pcrA RVT-GII HNHc pcrA ligA Feature: gene Location: 18570-19259 bp Feature: domain Description: PcrB_like Location: 18591-19236 bp Feature: domain Description: PcrB_like Location: 1 8591 -1 9236 bp Feature: gene Location: 19291-21138 bp Feature: domain Description: pcrA Location: 19315-21109 bp Feature: domain Description: pcrA Location: 1 931 5-21 1 09 bp Feature: gene Location: 21756-23534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22050-22800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22050-22800 bp Feature: domain Description: HNHc Note: nucleases Location: 23343-23427 bp Feature: domain Description: HNHc Note: nucleases Location: 23343-23427 bp Feature: gene Location: 23560-24081 bp Feature: domain Description: pcrA Location: 23620-24073 bp Feature: domain Description: pcrA Location: 23620-24073 bp Feature: gene Location: 24096-26093 bp Feature: domain Description: ligA Location: 24102-26088 bp Feature: domain Description: ligA Location: 241 02-26088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcrB_like (cd02812), pcrA (TIGR01073), RVT-GII, HNHc (smart00507), ligA (PRK14351)

Seq: SZPU01000106.1 Lysinibacillus mangiferihumi strain CCTCC AB 2010389 contig_92__1..1171_, whole genome shotgun sequence (1171 bp)
Overview 1 RT 1: 1-820 bp Neighborhood of RT #1 [1, 828] RVT-GII Feature: gene Location: 1-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202-820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 02 -82 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SZPU01000010.1 Lysinibacillus mangiferihumi strain CCTCC AB 2010389 contig_9__1..99589_, whole genome shotgun sequence (99589 bp)
Overview 1 RT 1: 56721-63341 bp Neighborhood of RT #1 [56721, 63343] trpA recJ RVT-GII recJ ssDNA-exonuc_C PRK02304 Feature: gene Location: 56721-57515 bp Feature: domain Description: trpA Location: 56742-57486 bp Feature: domain Description: trpA Location: 56742-57486 bp Feature: gene Location: 57706-57996 bp Feature: domain Description: recJ Location: 57790-57979 bp Feature: domain Description: recJ Location: 57790-57979 bp Feature: gene Location: 58702-60591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59032-59770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5903 2-59770 bp Feature: gene Location: 60723-62816 bp Feature: domain Description: recJ Location: 60756-62163 bp Feature: domain Description: recJ Location: 60756-62163 bp Feature: domain Description: ssDNA-exonuc_C Location: 62181-62778 bp Feature: domain Description: ssDNA-exonuc_C Location: 62181-62778 bp Feature: gene Location: 62831-63343 bp Feature: domain Description: PRK02304 Location: 62834-63341 bp Feature: domain Description: PRK023 04 Location: 6283 4-63 3 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trpA (TIGR00262), recJ (TIGR00644), RVT-GII, ssDNA-exonuc_C (pfam10141), PRK02304 (adenine phosphoribosyltransferase; Provisional)