myRT

myRT report for GCA_005222705.1_ASM522270v1

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Seq: STGF01000017.1 Paenibacillus sp. SY21-1 SY21-1_ctg0017, whole genome shotgun sequence (136779 bp)
Overview 1 RT 1: 120507-125228 bp Neighborhood of RT #1 [120507, 125230] RVT-CRISPR-like HTH_XRE PRK00024 Feature: gene Location: 120507-121166 bp Feature: gene Location: 121526-122419 bp Feature: gene Location: 122572-123417 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 122830-123328 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 22830-1 23328 bp Feature: gene Location: 123813-124142 bp Feature: domain Description: HTH_XRE Location: 123927-124077 bp Feature: domain Description: HTH_XRE Location: 1 23927-1 24077 bp Feature: gene Location: 124628-125230 bp Feature: domain Description: PRK00024 Location: 124697-125228 bp Feature: domain Description: PRK00024 Location: 1 24697-1 25228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, HTH_XRE (smart00530), PRK00024 (DNA repair protein RadC)

Seq: STGF01000059.1 Paenibacillus sp. SY21-1 SY21-1_ctg0059, whole genome shotgun sequence (2044 bp)
Overview 1 RT 1: 247-1803 bp Neighborhood of RT #1 [247, 1964] RVT-GII GIIM Feature: gene Location: 247-420 bp Feature: gene Location: 642-1964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-1524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 903-152 4 bp Feature: domain Description: GIIM Note: maturase Location: 1572-1803 bp Feature: domain Description: GIIM Note: maturase Location: 1572 -1803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: STGF01000061.1 Paenibacillus sp. SY21-1 SY21-1_ctg0061, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 230-1653 bp Neighborhood of RT #1 [230, 1838] RVT-GII GIIM Feature: gene Location: 230-364 bp Feature: gene Location: 576-1838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-13 89 bp Feature: domain Description: GIIM Note: maturase Location: 1443-1653 bp Feature: domain Description: GIIM Note: maturase Location: 1443 -1653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)