myRT

myRT report for GCA_005222835.1_ASM522283v1

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Seq: STGA01000072.1 Rhizobium sp. FKY42 NODE_164_length_12506_cov_69.542618, whole genome shotgun sequence (12576 bp)
Overview 1 RT 1: 9147-12393 bp Neighborhood of RT #1 [9147, 12575] MPTase-PolyVal RVT_N RVT-GII GIIM HNH ArdC Feature: gene Location: 9147-9620 bp Feature: domain Description: MPTase-PolyVal Location: 9171-9549 bp Feature: domain Description: MPTase-PolyVal Location: 91 71 -9549 bp Feature: gene Location: 9450-9818 bp Feature: gene Location: 9883-11574 bp Feature: domain Description: RVT_N Location: 9928-10174 bp Feature: domain Description: RVT_N Location: 9928-1 01 74 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10222-10861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0222-1 0861 bp Feature: domain Description: GIIM Note: maturase Location: 10939-11167 bp Feature: domain Description: GIIM Note: maturase Location: 1 0939-1 1 1 67 bp Feature: domain Description: HNH Note: nucleases Location: 11401-11527 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 401 -1 1 527 bp Feature: gene Location: 11635-11916 bp Feature: gene Location: 11940-12575 bp Feature: domain Description: ArdC Location: 12138-12393 bp Feature: domain Description: ArdC Location: 1 21 38-1 2393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPTase-PolyVal (pfam18818), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), ArdC (COG4227)

Seq: STGA01000015.1 Rhizobium sp. FKY42 NODE_17_length_66063_cov_181.140015, whole genome shotgun sequence (66133 bp)
Overview 1 RT 1: 59184-62185 bp Neighborhood of RT #1 [59184, 62202] group_II_RT_mat RVT-GII DDE_Tnp_IS66 Feature: gene Location: 59184-59861 bp Feature: gene Location: 59870-60208 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 59900-60095 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 59900-60095 bp Feature: gene Location: 60150-61133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60354-60957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60354-60957 bp Feature: gene Location: 61309-61659 bp Feature: gene Location: 61858-62202 bp Feature: domain Description: DDE_Tnp_IS66 Location: 61957-62185 bp Feature: domain Description: DDE_Tnp_IS66 Location: 61957-62 185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: STGA01000016.1 Rhizobium sp. FKY42 NODE_18_length_121770_cov_212.675339, whole genome shotgun sequence (121840 bp)
Overview 1 RT 1: 92765-96355 bp Neighborhood of RT #1 [92765, 96355] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 92765-93376 bp Feature: gene Location: 93550-93840 bp Feature: domain Description: Cas2_I_II_III Location: 93580-93799 bp Feature: domain Description: Cas2_I_II_III Location: 93 580-93 799 bp Feature: gene Location: 93846-95822 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 94068-94671 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 94068-94671 bp Feature: domain Description: Cas1_I-II-III Location: 94824-95778 bp Feature: domain Description: Cas1_I-II-III Location: 94824-95778 bp Feature: gene Location: 95433-96146 bp Feature: gene Location: 96173-96355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)