myRT

myRT report for GCA_005233705.1_ASM523370v1

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Seq: QGAD01000016.1 Paenibacillus sp. CFBP13512 P1116, whole genome shotgun sequence (75525 bp)
Overview 1 RT 1: 3-2823 bp Neighborhood of RT #1 [3, 2828] RVT-AbiA GalU GtrA Feature: gene Location: 3-1469 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 429-942 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 429-942 bp Feature: gene Location: 2134-2298 bp Feature: domain Description: GalU Location: 2137-2293 bp Feature: domain Description: GalU Location: 21 37-2293 bp Feature: gene Location: 2451-2828 bp Feature: domain Description: GtrA Location: 2490-2823 bp Feature: domain Description: GtrA Location: 2490-2823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA, GalU (COG1210), GtrA (pfam04138)

Seq: QGAD01000031.1 Paenibacillus sp. CFBP13512 P1131, whole genome shotgun sequence (25608 bp)
Overview 1 RT 1: 4942-13777 bp Neighborhood of RT #1 [4942, 13794] Beta_helix Beta_helix NorM RVT-UG12 COG3183 GH43_GsAbnA-like GH43_C Laminin_G_3 Feature: gene Location: 4942-6486 bp Feature: domain Description: Beta_helix Location: 5302-5695 bp Feature: domain Description: Beta_helix Location: 5302 -5695 bp Feature: domain Description: Beta_helix Location: 5737-6211 bp Feature: domain Description: Beta_helix Location: 5737-62 11 bp Feature: gene Location: 6661-8055 bp Feature: domain Description: NorM Location: 6733-8047 bp Feature: domain Description: NorM Location: 6733-8047 bp Feature: gene Location: 8391-10049 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8787-9261 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8787-92 61 bp Feature: gene Location: 10080-10853 bp Feature: domain Description: COG3183 Location: 10518-10827 bp Feature: domain Description: COG3183 Location: 10518-1082 7 bp Feature: gene Location: 11218-13794 bp Feature: domain Description: GH43_GsAbnA-like Location: 11419-12556 bp Feature: domain Description: GH43_GsAbnA-like Location: 11419-12 556 bp Feature: domain Description: GH43_C Location: 12583-12892 bp Feature: domain Description: GH43_C Location: 12 583-12 892 bp Feature: domain Description: Laminin_G_3 Location: 13336-13777 bp Feature: domain Description: Laminin_G_3 Location: 13336-13777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Beta_helix (pfam13229), NorM (COG0534), RVT-UG12, COG3183 (Predicted restriction endonuclease, HNH family ), GH43_GsAbnA-like (cd18832), GH43_C (pfam16369), Laminin_G_3 (pfam13385)