myRT

myRT report for GCA_005234595.1_ASM523459v1

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Seq: QPTK01000001.1 Enterococcus faecium strain AR98-565 NODE_1_length_146005_cov_38.8798_ID_1011, whole genome shotgun sequence (146005 bp)
Overview 1 RT 1: 112679-118224 bp Neighborhood of RT #1 [112679, 118250] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK dcm Feature: gene Location: 112679-113023 bp Feature: domain Description: RelB_DinJ Location: 112889-113015 bp Feature: domain Description: RelB_DinJ Location: 1 1 2889-1 1 301 5 bp Feature: gene Location: 113092-114108 bp Feature: domain Description: FtsK_SpoIIIE Location: 113749-113989 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 1 3749-1 1 3989 bp Feature: gene Location: 114702-116576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115068-115764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 5068-1 1 5764 bp Feature: domain Description: HNHc Note: nucleases Location: 116304-116463 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 6304-1 1 6463 bp Feature: gene Location: 116678-117058 bp Feature: domain Description: FtsK Location: 116693-116930 bp Feature: domain Description: FtsK Location: 1 1 6693-1 1 6930 bp Feature: gene Location: 117096-118250 bp Feature: domain Description: dcm Location: 117183-118224 bp Feature: domain Description: dcm Location: 1 1 71 83-1 1 8224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), dcm (TIGR00675)

Seq: QPTK01000081.1 Enterococcus faecium strain AR98-565 NODE_81_length_7566_cov_47.561_ID_4502, whole genome shotgun sequence (7566 bp)
Overview 1 RT 1: 2845-6864 bp Neighborhood of RT #1 [2845, 7526] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HsdM RVT-AbiP2 Feature: gene Location: 2845-4098 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 3109-3460 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 3109-3460 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 3517-4093 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 3517-4093 bp Feature: gene Location: 4091-5713 bp Feature: domain Description: HsdM Location: 4112-5639 bp Feature: domain Description: HsdM Location: 4112 -5639 bp Feature: gene Location: 6051-7526 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6399-6864 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6399-6864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdM (COG0286), RVT-AbiP2