myRT

myRT report for GCA_005239265.1_ASM523926v1

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Seq: CP039968.1 Klebsiella pneumoniae strain R1701 chromosome, complete genome (5438860 bp)
Overview 1 RT 1: 1797640-1804111 bp 2 RT 2: 3280755-3284608 bp 3 RT 3: 3624599-3627504 bp 4 RT 4: 4066111-4069563 bp Neighborhood of RT #1 [1797640, 1804125] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3280755, 3284608] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3624599, 3627554] RVT-GII int Neighborhood of RT #4 [4066111, 4069619] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1797640-1799064 bp Feature: domain Description: SbcB Location: 1797646-1799062 bp Feature: domain Description: SbcB Location: 1 797646-1 799062 bp Feature: gene Location: 1799239-1800408 bp Feature: domain Description: dacD Location: 1799248-1800403 bp Feature: domain Description: dacD Location: 1 799248-1 800403 bp Feature: gene Location: 1800926-1802413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1801331-1802021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 801 331 -1 802021 bp Feature: gene Location: 1802495-1802968 bp Feature: domain Description: PRK10016 Location: 1802498-1802957 bp Feature: domain Description: PRK1 001 6 Location: 1 802498-1 802957 bp Feature: gene Location: 1803052-1804125 bp Feature: domain Description: YccC Location: 1803073-1804111 bp Feature: domain Description: YccC Location: 1 803073-1 8041 1 1 bp Feature: gene Location: 3280755-3282020 bp Feature: domain Description: umuC Location: 3280758-3282018 bp Feature: domain Description: umuC Location: 3280758-328201 8 bp Feature: gene Location: 3282023-3282442 bp Feature: domain Description: PRK10276 Location: 3282026-3282437 bp Feature: domain Description: PRK1 0276 Location: 3282026-3282437 bp Feature: gene Location: 3282521-3284005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282923-3283613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282923-328361 3 bp Feature: gene Location: 3284014-3284181 bp Feature: gene Location: 3284462-3284608 bp Feature: gene Location: 3624599-3626083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3625001-3625691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3625001 -3625691 bp Feature: gene Location: 3626092-3626259 bp Feature: gene Location: 3626502-3627554 bp Feature: domain Description: int Location: 3626505-3627504 bp Feature: domain Description: int Location: 3626505-3627504 bp Feature: gene Location: 4066111-4066428 bp Feature: domain Description: PRK10276 Location: 4066117-4066231 bp Feature: domain Description: PRK1 0276 Location: 40661 1 7-4066231 bp Feature: domain Description: PRK10276 Location: 4066258-4066327 bp Feature: domain Description: PRK1 0276 Location: 4066258-4066327 bp Feature: gene Location: 4066476-4066655 bp Feature: gene Location: 4066745-4068229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067147-4067837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40671 47-4067837 bp Feature: gene Location: 4068238-4068405 bp Feature: gene Location: 4068888-4069619 bp Feature: domain Description: Laminin_G_3 Location: 4069209-4069563 bp Feature: domain Description: Laminin_G_3 Location: 4069209-4069563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), Laminin_G_3 (pfam13385)

Seq: CP039969.1 Klebsiella pneumoniae strain R1701 plasmid p1701_01, complete sequence (168369 bp)
Overview 1 RT 1: 157996-161244 bp Neighborhood of RT #1 [157996, 161258] RVT-GII PRK10276 Feature: gene Location: 157996-158217 bp Feature: gene Location: 158479-158709 bp Feature: gene Location: 158943-160430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159348-160038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159348-160038 bp Feature: gene Location: 160436-160603 bp Feature: gene Location: 160833-161258 bp Feature: domain Description: PRK10276 Location: 160836-161244 bp Feature: domain Description: PRK102 76 Location: 160836-1612 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP039971.1 Klebsiella pneumoniae strain R1701 plasmid p1701_03, complete sequence (113987 bp)
Overview 1 RT 1: 22724-26409 bp Neighborhood of RT #1 [22724, 26459] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 22724-23101 bp Feature: domain Description: DDE_Tnp_IS1 Location: 22727-23099 bp Feature: domain Description: DDE_Tnp_IS1 Location: 22727-23 099 bp Feature: gene Location: 23146-23421 bp Feature: domain Description: InsA Location: 23149-23413 bp Feature: domain Description: InsA Location: 23 149-23 413 bp Feature: gene Location: 23573-25060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23978-24668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 978-24668 bp Feature: gene Location: 25214-25759 bp Feature: domain Description: PRK10276 Location: 25517-25751 bp Feature: domain Description: PRK10276 Location: 25517-25751 bp Feature: gene Location: 25896-26459 bp Feature: domain Description: umuC Location: 25899-26409 bp Feature: domain Description: umuC Location: 25899-26409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)