myRT

myRT report for GCA_005239285.1_ASM523928v1

Download annotations/find similar RTs

Seq: CP039974.1 Klebsiella pneumoniae strain R1761 chromosome, complete genome (5294382 bp)
Overview 1 RT 1: 1789939-1796410 bp 2 RT 2: 3135785-3139638 bp 3 RT 3: 3479884-3482789 bp 4 RT 4: 3921639-3924722 bp Neighborhood of RT #1 [1789939, 1796424] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3135785, 3139638] umuC PRK10276 RVT-GII Neighborhood of RT #3 [3479884, 3482839] RVT-GII int Neighborhood of RT #4 [3921639, 3924778] group_II_RT_mat RVT-GII Laminin_G_3 Feature: gene Location: 1789939-1791363 bp Feature: domain Description: SbcB Location: 1789945-1791361 bp Feature: domain Description: SbcB Location: 1 789945-1 791 361 bp Feature: gene Location: 1791538-1792707 bp Feature: domain Description: dacD Location: 1791547-1792702 bp Feature: domain Description: dacD Location: 1 791 547-1 792702 bp Feature: gene Location: 1793225-1794712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1793630-1794320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 793630-1 794320 bp Feature: gene Location: 1794794-1795267 bp Feature: domain Description: PRK10016 Location: 1794797-1795256 bp Feature: domain Description: PRK1 001 6 Location: 1 794797-1 795256 bp Feature: gene Location: 1795351-1796424 bp Feature: domain Description: YccC Location: 1795372-1796410 bp Feature: domain Description: YccC Location: 1 795372-1 79641 0 bp Feature: gene Location: 3135785-3137050 bp Feature: domain Description: umuC Location: 3135788-3137048 bp Feature: domain Description: umuC Location: 31 35788-31 37048 bp Feature: gene Location: 3137053-3137472 bp Feature: domain Description: PRK10276 Location: 3137056-3137467 bp Feature: domain Description: PRK1 0276 Location: 31 37056-31 37467 bp Feature: gene Location: 3137551-3139035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3137953-3138643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 37953-31 38643 bp Feature: gene Location: 3139044-3139211 bp Feature: gene Location: 3139492-3139638 bp Feature: gene Location: 3479884-3481368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3480286-3480976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3480286-3480976 bp Feature: gene Location: 3481377-3481544 bp Feature: gene Location: 3481787-3482839 bp Feature: domain Description: int Location: 3481790-3482789 bp Feature: domain Description: int Location: 3481 790-3482789 bp Feature: gene Location: 3921639-3921818 bp Feature: gene Location: 3921908-3922237 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3921914-3922103 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3921 91 4-39221 03 bp Feature: gene Location: 3922261-3923388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3922660-3923272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3922660-3923272 bp Feature: gene Location: 3923397-3923564 bp Feature: gene Location: 3924047-3924778 bp Feature: domain Description: Laminin_G_3 Location: 3924368-3924722 bp Feature: domain Description: Laminin_G_3 Location: 3924368-3924722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), group_II_RT_mat (TIGR04416), Laminin_G_3 (pfam13385)

Seq: CP039975.1 Klebsiella pneumoniae strain R1761 plasmid p1761_01 (282961 bp)
Overview 1 RT 1: 102653-107095 bp 2 RT 2: 256436-259684 bp Neighborhood of RT #1 [102653, 107097] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #2 [256436, 259698] RVT-GII PRK10276 Feature: gene Location: 102653-103924 bp Feature: domain Description: umuC Location: 102656-103916 bp Feature: domain Description: umuC Location: 102 656-103916 bp Feature: gene Location: 103924-104607 bp Feature: domain Description: PRK10276 Location: 104227-104590 bp Feature: domain Description: PRK102 76 Location: 1042 2 7-104590 bp Feature: gene Location: 104761-106248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105166-105856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105166-105856 bp Feature: gene Location: 106400-106675 bp Feature: domain Description: InsA Location: 106403-106667 bp Feature: domain Description: InsA Location: 106403-106667 bp Feature: gene Location: 106594-107097 bp Feature: domain Description: DDE_Tnp_IS1 Location: 106705-107095 bp Feature: domain Description: DDE_Tnp_IS1 Location: 106705-107095 bp Feature: gene Location: 256436-256657 bp Feature: gene Location: 256919-257149 bp Feature: gene Location: 257383-258870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257788-258478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 57788-2 58478 bp Feature: gene Location: 258876-259043 bp Feature: gene Location: 259273-259698 bp Feature: domain Description: PRK10276 Location: 259276-259684 bp Feature: domain Description: PRK102 76 Location: 2 592 76-2 59684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)