myRT

myRT report for GCA_005239945.1_ASM523994v1

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Seq: SBAY01000056.1 Nitrospira sp. isolate Bin_21_1 Hy_contig20670, whole genome shotgun sequence (8545 bp)
Overview 1 RT 1: 1-1712 bp Neighborhood of RT #1 [1, 1717] RVT-GII FepB FepB Feature: gene Location: 1-174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 33 bp Feature: gene Location: 276-1355 bp Feature: domain Description: FepB Location: 288-1269 bp Feature: domain Description: FepB Location: 288-1 269 bp Feature: gene Location: 1373-1717 bp Feature: domain Description: FepB Location: 1400-1712 bp Feature: domain Description: FepB Location: 1 400-1 71 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FepB (COG4592)

Seq: SBAY01000180.1 Nitrospira sp. isolate Bin_21_1 Hy_contig26167, whole genome shotgun sequence (12461 bp)
Overview 1 RT 1: 9081-11660 bp Neighborhood of RT #1 [9081, 11660] Cas_csx3 CRISPR_Cas6 RVT-CRISPR GIIM Cas2_I_II_III Feature: gene Location: 9081-9251 bp Feature: domain Description: Cas_csx3 Location: 9114-9246 bp Feature: domain Description: Cas_csx3 Location: 9114-92 46 bp Feature: gene Location: 9253-10227 bp Feature: domain Description: CRISPR_Cas6 Location: 9823-10183 bp Feature: domain Description: CRISPR_Cas6 Location: 982 3-10183 bp Feature: gene Location: 10190-11488 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10397-11009 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10397-11009 bp Feature: domain Description: GIIM Note: maturase Location: 11108-11240 bp Feature: domain Description: GIIM Note: maturase Location: 11108-112 40 bp Feature: domain Description: Cas2_I_II_III Location: 11306-11453 bp Feature: domain Description: Cas2 _I_II_III Location: 11306-11453 bp Feature: gene Location: 11457-11660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_csx3 (pfam09620), CRISPR_Cas6 (pfam10040), RVT-CRISPR, GIIM (pfam08388), Cas2_I_II_III (cl11442)

Seq: SBAY01000348.1 Nitrospira sp. isolate Bin_21_1 Hy_contig29585, whole genome shotgun sequence (11991 bp)
Overview 1 RT 1: 7721-10741 bp Neighborhood of RT #1 [7721, 10776] Cas_csx3 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 7721-8278 bp Feature: gene Location: 8275-8520 bp Feature: domain Description: Cas_csx3 Location: 8383-8512 bp Feature: domain Description: Cas_csx3 Location: 83 83 -8512 bp Feature: gene Location: 8534-9493 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8744-9347 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8744-93 47 bp Feature: gene Location: 9486-10493 bp Feature: domain Description: Cas1_I-II-III Location: 9495-10452 bp Feature: domain Description: Cas1_I-II-III Location: 9495-10452 bp Feature: gene Location: 10495-10776 bp Feature: domain Description: Cas2_I_II_III Location: 10510-10741 bp Feature: domain Description: Cas2_I_II_III Location: 10510-10741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_csx3 (pfam09620), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)