myRT

myRT report for GCA_005280205.1_ASM528020v1

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Seq: SUND01000040.1 Bacillus sp. XXST-01 NODE_40_length_2525_cov_160.279118, whole genome shotgun sequence (2525 bp)
Overview 1 RT 1: 104-2524 bp Neighborhood of RT #1 [104, 2524] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 104-1915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1 1 99 bp Feature: domain Description: Intron_maturas2 Location: 1277-1631 bp Feature: domain Description: Intron_maturas2 Location: 1 277-1 631 bp Feature: domain Description: HNHc Note: nucleases Location: 1718-1886 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 8-1 886 bp Feature: gene Location: 2345-2524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SUND01000043.1 Bacillus sp. XXST-01 NODE_43_length_1870_cov_100.617496, whole genome shotgun sequence (1870 bp)
Overview 1 RT 1: 3-1630 bp Neighborhood of RT #1 [3, 1791] RVT-GII GIIM Feature: gene Location: 3-161 bp Feature: gene Location: 502-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -1357 bp Feature: domain Description: GIIM Note: maturase Location: 1414-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1414-1630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SUND01000005.1 Bacillus sp. XXST-01 NODE_5_length_234733_cov_50.086108, whole genome shotgun sequence (234733 bp)
Overview 1 RT 1: 25635-29514 bp Neighborhood of RT #1 [25635, 29528] PRK07275 YwpF RVT-GII GIIM Mycoplas_LppA fabZ Feature: gene Location: 25635-26015 bp Feature: domain Description: PRK07275 Location: 25656-25974 bp Feature: domain Description: PRK07275 Location: 25656-25974 bp Feature: gene Location: 26272-26706 bp Feature: domain Description: YwpF Location: 26278-26665 bp Feature: domain Description: YwpF Location: 26278-26665 bp Feature: gene Location: 26776-28065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27016-27631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27016-2763 1 bp Feature: domain Description: GIIM Note: maturase Location: 27688-27910 bp Feature: domain Description: GIIM Note: maturase Location: 27688-27910 bp Feature: gene Location: 28604-28963 bp Feature: domain Description: Mycoplas_LppA Location: 28628-28955 bp Feature: domain Description: Mycoplas_LppA Location: 28628-28955 bp Feature: gene Location: 29094-29528 bp Feature: domain Description: fabZ Location: 29097-29514 bp Feature: domain Description: fabZ Location: 29097-29514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07275 (single-stranded DNA-binding protein; Provisional), YwpF (pfam14183), RVT-GII, GIIM (pfam08388), Mycoplas_LppA (TIGR03490), fabZ (TIGR01750)

Seq: SUND01000008.1 Bacillus sp. XXST-01 NODE_8_length_194358_cov_50.145266, whole genome shotgun sequence (194358 bp)
Overview 1 RT 1: 79940-86270 bp Neighborhood of RT #1 [79940, 86270] lipoyltrans PRK07656 RVT-GII GIIM Acetyltransf_1 Feature: gene Location: 79940-80938 bp Feature: domain Description: lipoyltrans Location: 79958-80918 bp Feature: domain Description: lipoyltrans Location: 79958-80918 bp Feature: gene Location: 81204-82757 bp Feature: domain Description: PRK07656 Location: 81207-82740 bp Feature: domain Description: PRK07656 Location: 81207-8274 0 bp Feature: gene Location: 83988-85142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84255-84879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 255-84 879 bp Feature: domain Description: GIIM Note: maturase Location: 84921-85131 bp Feature: domain Description: GIIM Note: maturase Location: 84 921-85131 bp Feature: gene Location: 85651-86043 bp Feature: domain Description: Acetyltransf_1 Location: 85720-86008 bp Feature: domain Description: Acetyltransf_1 Location: 85720-86008 bp Feature: gene Location: 86121-86270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lipoyltrans (TIGR00545), PRK07656 (long-chain-fatty-acid--CoA ligase; Validated), RVT-GII, GIIM (pfam08388), Acetyltransf_1 (pfam00583)