myRT

myRT report for GCA_005281155.1_ASM528115v1

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Seq: SZXK01000002.1 Citrobacter sp. wls618 contig38, whole genome shotgun sequence (79022 bp)
Overview 1 RT 1: 47589-52605 bp Neighborhood of RT #1 [47589, 52605] SSL2 RVT-GII GIIM PHA02517 Feature: gene Location: 47589-49175 bp Feature: domain Description: SSL2 Location: 47694-47874 bp Feature: domain Description: SSL2 Location: 47694-47874 bp Feature: gene Location: 49302-49862 bp Feature: gene Location: 50156-51679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50429-51161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50429-51 1 61 bp Feature: domain Description: GIIM Note: maturase Location: 51236-51434 bp Feature: domain Description: GIIM Note: maturase Location: 51 236-51 434 bp Feature: gene Location: 51856-52236 bp Feature: domain Description: PHA02517 Location: 51859-52228 bp Feature: domain Description: PHA0251 7 Location: 51 859-52228 bp Feature: gene Location: 52414-52605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: SZXK01000082.1 Citrobacter sp. wls618 contig50, whole genome shotgun sequence (73088 bp)
Overview 1 RT 1: 29402-36581 bp Neighborhood of RT #1 [29402, 36676] YjcB RVT-UG8 RVT-UG3 COG4688 Feature: gene Location: 29402-29683 bp Feature: domain Description: YjcB Location: 29405-29672 bp Feature: domain Description: YjcB Location: 2 9405-2 9672 bp Feature: gene Location: 30187-30351 bp Feature: gene Location: 30795-32837 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 31407-31854 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 31407-31854 bp Feature: gene Location: 32830-34179 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 33286-33763 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 332 86-33763 bp Feature: gene Location: 34231-34650 bp Feature: gene Location: 34643-36676 bp Feature: domain Description: COG4688 Location: 34646-36581 bp Feature: domain Description: COG4688 Location: 34646-36581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjcB (pfam15940), RVT-UG8, RVT-UG3, COG4688 (Uncharacterized protein )