myRT

myRT report for GCA_005381925.1_ASM538192v1

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Seq: BFGR01000041.1 Escherichia coli CM14 DNA, sequence41, whole genome shotgun sequence (38889 bp)
Overview 1 RT 1: 797-5296 bp Neighborhood of RT #1 [797, 5296] YhhI YhhI YhhI DDE_Tnp_1_assoc RVT-GII GIIM Feature: gene Location: 797-1198 bp Feature: domain Description: YhhI Location: 800-884 bp Feature: domain Description: YhhI Location: 800-884 bp Feature: domain Description: YhhI Location: 911-983 bp Feature: domain Description: YhhI Location: 91 1 -983 bp Feature: domain Description: YhhI Location: 1007-1196 bp Feature: domain Description: YhhI Location: 1 007-1 1 96 bp Feature: gene Location: 1303-1458 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 1324-1399 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 1 324-1 399 bp Feature: gene Location: 1665-2987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1941-2598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 941 -2598 bp Feature: domain Description: GIIM Note: maturase Location: 2688-2895 bp Feature: domain Description: GIIM Note: maturase Location: 2688-2895 bp Feature: gene Location: 3719-4384 bp Feature: gene Location: 4397-5296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388), YhhI (COG5433)

Seq: BFGR01000014.1 Escherichia coli CM14 DNA, sequence14, whole genome shotgun sequence (363227 bp)
Overview 1 RT 1: 45128-48894 bp Neighborhood of RT #1 [45128, 48894] Q RVT-Retrons HTH_XRE Feature: gene Location: 45128-46162 bp Feature: domain Description: Q Location: 45131-46154 bp Feature: domain Description: Q Location: 45131-46154 bp Feature: gene Location: 46500-47300 bp Feature: gene Location: 47466-48416 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47649-48183 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47649-48183 bp Feature: gene Location: 48400-48702 bp Feature: domain Description: HTH_XRE Location: 48412-48574 bp Feature: domain Description: HTH_XRE Location: 48412 -48574 bp Feature: gene Location: 48739-48894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, HTH_XRE (smart00530)