myRT

myRT report for GCA_005382525.1_ASM538252v1

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Seq: BFHT01000066.1 Escherichia coli ECSC024 DNA, sequence66, whole genome shotgun sequence (18617 bp)
Overview 1 RT 1: 13772-18382 bp Neighborhood of RT #1 [13772, 18402] PRK10173 PRK10173 RVT-GII rve PRK08181 Feature: gene Location: 13772-14221 bp Ori: GCO38849.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 13775-14213 bp Feature: domain Description: PRK1 01 73 Location: 1 3775-1 421 3 bp Feature: gene Location: 14196-14516 bp Ori: GCO38855.1 Gene: agp_3 Feature: domain Description: PRK10173 Location: 14199-14427 bp Feature: domain Description: PRK1 01 73 Location: 1 41 99-1 4427 bp Feature: gene Location: 14581-15057 bp Ori: GCO38862.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14854-14923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4854-1 4923 bp Feature: gene Location: 16151-17650 bp Ori: GCO38867.1 Feature: domain Description: rve Location: 16523-16916 bp Feature: domain Description: rve Location: 1 6523-1 691 6 bp Feature: gene Location: 17647-18402 bp Ori: GCO38874.1 Feature: domain Description: PRK08181 Location: 17671-18382 bp Feature: domain Description: PRK081 81 Location: 1 7671 -1 8382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated)

Seq: BFHT01000077.1 Escherichia coli ECSC024 DNA, sequence77, whole genome shotgun sequence (3242 bp)
Overview 1 RT 1: 11-2225 bp Neighborhood of RT #1 [11, 2263] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 11-1357 bp Ori: GCO41360.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-839 bp Feature: domain Description: GIIM Note: maturase Location: 914-1112 bp Feature: domain Description: GIIM Note: maturase Location: 914-1112 bp Feature: gene Location: 1474-1830 bp Ori: GCO41367.1 Feature: domain Description: PHA02517 Location: 1477-1786 bp Feature: domain Description: PHA02 517 Location: 1477-1786 bp Feature: gene Location: 1859-2263 bp Ori: GCO41372.1 Feature: domain Description: InsE Location: 1889-2225 bp Feature: domain Description: InsE Location: 1889-2 2 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFHT01000053.1 Escherichia coli ECSC024 DNA, sequence53, whole genome shotgun sequence (213620 bp)
Overview 1 RT 1: 192025-197344 bp Neighborhood of RT #1 [192025, 197370] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 192025-193254 bp Ori: GCO37541.1 Feature: domain Description: YesM Location: 192505-193246 bp Feature: domain Description: YesM Location: 192505-193 246 bp Feature: gene Location: 193327-193515 bp Feature: gene Location: 193837-194319 bp Ori: GCO37552.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193846-194086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193 846-194086 bp Feature: domain Description: GIIM Note: maturase Location: 194134-194314 bp Feature: domain Description: GIIM Note: maturase Location: 19413 4-1943 14 bp Feature: gene Location: 194386-194925 bp Ori: GCO37559.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194716-194794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194716-194794 bp Feature: gene Location: 195411-196316 bp Feature: gene Location: 196453-197370 bp Ori: GCO37573.1 Feature: domain Description: PFLE_PFLC Location: 196489-197344 bp Feature: domain Description: PFLE_PFLC Location: 196489-1973 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)