myRT

myRT report for GCA_005382785.1_ASM538278v1

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Seq: BFIE01000023.1 Escherichia coli ECSC035 DNA, sequence23, whole genome shotgun sequence (27939 bp)
Overview 1 RT 1: 88-2302 bp Neighborhood of RT #1 [88, 2340] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 88-1434 bp Ori: GCN15965.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184-916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 84-91 6 bp Feature: domain Description: GIIM Note: maturase Location: 991-1189 bp Feature: domain Description: GIIM Note: maturase Location: 991 -1 1 89 bp Feature: gene Location: 1551-1907 bp Ori: GCN15973.1 Feature: domain Description: PHA02517 Location: 1554-1863 bp Feature: domain Description: PHA0251 7 Location: 1 554-1 863 bp Feature: gene Location: 1936-2340 bp Ori: GCN15981.1 Feature: domain Description: InsE Location: 1966-2302 bp Feature: domain Description: InsE Location: 1 966-2302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFIE01000011.1 Escherichia coli ECSC035 DNA, sequence11, whole genome shotgun sequence (24290 bp)
Overview 1 RT 1: 13555-18166 bp Neighborhood of RT #1 [13555, 18186] PRK10173 PRK10173 RVT-GII rve PRK08181 Feature: gene Location: 13555-14004 bp Ori: GCN13786.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 13558-13996 bp Feature: domain Description: PRK10173 Location: 13558-13996 bp Feature: gene Location: 13979-14299 bp Ori: GCN13793.1 Gene: agp_3 Feature: domain Description: PRK10173 Location: 13982-14210 bp Feature: domain Description: PRK10173 Location: 13982 -142 10 bp Feature: gene Location: 14338-14841 bp Ori: GCN13800.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14611-14680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14611-14680 bp Feature: gene Location: 15935-17434 bp Ori: GCN13808.1 Feature: domain Description: rve Location: 16307-16700 bp Feature: domain Description: rve Location: 16307-16700 bp Feature: gene Location: 17431-18186 bp Ori: GCN13815.1 Feature: domain Description: PRK08181 Location: 17455-18166 bp Feature: domain Description: PRK08181 Location: 17455-18166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated)

Seq: BFIE01000001.1 Escherichia coli ECSC035 DNA, sequence01, whole genome shotgun sequence (738244 bp)
Overview 1 RT 1: 98613-104522 bp Neighborhood of RT #1 [98613, 104522] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98613-99038 bp Feature: gene Location: 99949-100458 bp Ori: GCM98687.1 Feature: domain Description: HTH_36 Location: 100135-100291 bp Feature: domain Description: HTH_3 6 Location: 10013 5-100291 bp Feature: gene Location: 100666-102165 bp Ori: GCM98693.1 Gene: CorA Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101098-101554 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101098-101554 bp Feature: gene Location: 102566-103891 bp Ori: GCM98700.1 Feature: domain Description: DUF4062 Location: 102587-102830 bp Feature: domain Description: DUF4062 Location: 102587-10283 0 bp Feature: gene Location: 103941-104522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFIE01000044.1 Escherichia coli ECSC035 DNA, sequence44, whole genome shotgun sequence (589380 bp)
Overview 1 RT 1: 68776-73753 bp Neighborhood of RT #1 [68776, 73753] PRK13889 RVT-UG16 Feature: gene Location: 68776-69141 bp Feature: gene Location: 69789-71282 bp Ori: GCN25637.1 Feature: domain Description: PRK13889 Location: 69792-70392 bp Feature: domain Description: PRK13889 Location: 69792-70392 bp Feature: gene Location: 71420-72904 bp Ori: GCN25643.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 71783-72191 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 71783-72191 bp Feature: gene Location: 73033-73554 bp Feature: gene Location: 73499-73753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16