myRT

myRT report for GCA_005382945.1_ASM538294v1

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Seq: BFIM01000025.1 Escherichia coli ECSC044 DNA, sequence25, whole genome shotgun sequence (218543 bp)
Overview 1 RT 1: 156-5783 bp Neighborhood of RT #1 [156, 6040] AAA_15 RVT-Retrons Nuc_deoxyrib_tr HTH_23 Feature: gene Location: 156-2402 bp Feature: domain Description: AAA_15 Location: 159-1167 bp Feature: domain Description: AAA_1 5 Location: 1 59-1 1 67 bp Feature: gene Location: 2517-3617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2700-3228 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2700-3228 bp Feature: gene Location: 4273-5391 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5044-5215 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5044-521 5 bp Feature: gene Location: 5564-6040 bp Feature: domain Description: HTH_23 Location: 5642-5783 bp Feature: domain Description: HTH_23 Location: 5642-5783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), HTH_23 (pfam13384)

Seq: BFIM01000051.1 Escherichia coli ECSC044 DNA, sequence51, whole genome shotgun sequence (186575 bp)
Overview 1 RT 1: 51784-55665 bp Neighborhood of RT #1 [51784, 55670] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51784-52242 bp Feature: domain Description: dut Location: 51790-52237 bp Feature: domain Description: dut Location: 51790-52 2 37 bp Feature: gene Location: 52349-52945 bp Feature: domain Description: slmA Location: 52355-52931 bp Feature: domain Description: slmA Location: 52 355-52 931 bp Feature: gene Location: 52991-53950 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53126-53675 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5312 6-53675 bp Feature: gene Location: 54248-54889 bp Feature: domain Description: pyrE Location: 54251-54884 bp Feature: domain Description: pyrE Location: 542 51-54884 bp Feature: gene Location: 54954-55670 bp Feature: domain Description: rph Location: 54957-55665 bp Feature: domain Description: rph Location: 54957-55665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)