myRT

myRT report for GCA_005383005.1_ASM538300v1

Download annotations/find similar RTs

Seq: BFIP01000061.1 Escherichia coli ECSC048 DNA, sequence061, whole genome shotgun sequence (50961 bp)
Overview 1 RT 1: 35482-41701 bp Neighborhood of RT #1 [35482, 41701] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 35482-36444 bp Feature: gene Location: 36757-37713 bp Ori: GCP67908.1 Gene: ydcC_2 Feature: domain Description: YhhI Location: 36760-37105 bp Feature: domain Description: YhhI Location: 36760-371 05 bp Feature: domain Description: YhhI Location: 37162-37516 bp Feature: domain Description: YhhI Location: 371 62-3751 6 bp Feature: domain Description: YhhI Location: 37516-37696 bp Feature: domain Description: YhhI Location: 3751 6-37696 bp Feature: gene Location: 38245-39495 bp Ori: GCP67909.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38449-39106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38449-391 06 bp Feature: domain Description: GIIM Note: maturase Location: 39187-39409 bp Feature: domain Description: GIIM Note: maturase Location: 391 87-39409 bp Feature: gene Location: 39942-41078 bp Ori: GCP67910.1 Gene: ydcC_3 Feature: domain Description: YhhI Location: 39945-40308 bp Feature: domain Description: YhhI Location: 39945-40308 bp Feature: domain Description: YhhI Location: 40365-40719 bp Feature: domain Description: YhhI Location: 40365-4071 9 bp Feature: domain Description: YhhI Location: 40737-40980 bp Feature: domain Description: YhhI Location: 40737-40980 bp Feature: gene Location: 41198-41701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: BFIP01000001.1 Escherichia coli ECSC048 DNA, sequence001, whole genome shotgun sequence (12891 bp)
Overview 1 RT 1: 6366-12514 bp Neighborhood of RT #1 [6366, 12516] HsdM PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 6366-8789 bp Ori: GCP65474.1 Gene: hsdM_1 Feature: domain Description: HsdM Location: 6387-8331 bp Feature: domain Description: HsdM Location: 6387-8331 bp Feature: gene Location: 9048-9401 bp Ori: GCP65475.1 Feature: domain Description: PHA02517 Location: 9051-9396 bp Feature: domain Description: PHA02 517 Location: 9051-9396 bp Feature: gene Location: 9596-11119 bp Ori: GCP65476.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9869-10601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9869-10601 bp Feature: domain Description: GIIM Note: maturase Location: 10676-10874 bp Feature: domain Description: GIIM Note: maturase Location: 10676-10874 bp Feature: gene Location: 11711-12190 bp Ori: GCP65477.1 Feature: domain Description: PHA02517 Location: 11771-12125 bp Feature: domain Description: PHA02 517 Location: 11771-12 12 5 bp Feature: gene Location: 12190-12516 bp Ori: GCP65478.1 Feature: domain Description: InsE Location: 12193-12514 bp Feature: domain Description: InsE Location: 12 193-12 514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: BFIP01000004.1 Escherichia coli ECSC048 DNA, sequence004, whole genome shotgun sequence (17214 bp)
Overview 1 RT 1: 8097-11944 bp Neighborhood of RT #1 [8097, 11949] Tra5 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 8097-8348 bp Feature: gene Location: 8529-8960 bp Ori: GCP65487.1 Feature: domain Description: Tra5 Location: 8535-8952 bp Feature: domain Description: Tra5 Location: 853 5-8952 bp Feature: gene Location: 9071-10594 bp Ori: GCP65488.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9344-10076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 44-10076 bp Feature: domain Description: GIIM Note: maturase Location: 10151-10370 bp Feature: domain Description: GIIM Note: maturase Location: 10151-103 70 bp Feature: gene Location: 11186-11653 bp Ori: GCP65489.1 Feature: domain Description: PHA02517 Location: 11252-11591 bp Feature: domain Description: PHA02517 Location: 11252-11591 bp Feature: gene Location: 11650-11949 bp Ori: GCP65490.1 Feature: domain Description: InsE Location: 11680-11944 bp Feature: domain Description: InsE Location: 11680-11944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)