myRT

myRT report for GCA_005383065.1_ASM538306v1

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Seq: BFIS01000187.1 Escherichia coli ECSC052 DNA, sequence187, whole genome shotgun sequence (68986 bp)
Overview 1 RT 1: 46030-50469 bp Neighborhood of RT #1 [46030, 50469] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 46030-46263 bp Ori: GCM95118.1 Gene: ykfF_2 Feature: domain Description: DUF905 Location: 46060-46258 bp Feature: domain Description: DUF905 Location: 46060-46258 bp Feature: gene Location: 46321-46761 bp Ori: GCM95125.1 Gene: ssb_4 Feature: domain Description: PRK13732 Location: 46324-46759 bp Feature: domain Description: PRK1 3732 Location: 46324-46759 bp Feature: gene Location: 46956-48857 bp Ori: GCM95132.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47223-48054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47223-48054 bp Feature: domain Description: Intron_maturas2 Location: 48168-48426 bp Feature: domain Description: Intron_maturas2 Location: 481 68-48426 bp Feature: domain Description: HNHc Note: nucleases Location: 48600-48762 bp Feature: domain Description: HNHc Note: nucleases Location: 48600-48762 bp Feature: gene Location: 49432-49962 bp Feature: gene Location: 50278-50469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BFIS01000101.1 Escherichia coli ECSC052 DNA, sequence101, whole genome shotgun sequence (3393 bp)
Overview 1 RT 1: 1449-2514 bp Neighborhood of RT #1 [1449, 3227] RVT-UG16 Feature: gene Location: 1449-1703 bp Feature: gene Location: 1648-2169 bp Feature: gene Location: 2298-3227 bp Ori: GCM79329.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2301-2514 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2 301-2 514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16