myRT

myRT report for GCA_005383105.1_ASM538310v1

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Seq: BFIU01000006.1 Escherichia coli ECSC054 DNA, sequence006, whole genome shotgun sequence (7658 bp)
Overview 1 RT 1: 3478-7185 bp Neighborhood of RT #1 [3478, 7430] RVT-GII GIIM Feature: gene Location: 3478-3801 bp Feature: gene Location: 3849-4673 bp Feature: gene Location: 5907-7430 bp Ori: GCN34327.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6180-6912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 80-691 2 bp Feature: domain Description: GIIM Note: maturase Location: 6987-7185 bp Feature: domain Description: GIIM Note: maturase Location: 6987-71 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BFIU01000072.1 Escherichia coli ECSC054 DNA, sequence072, whole genome shotgun sequence (14604 bp)
Overview 1 RT 1: 8894-14279 bp Neighborhood of RT #1 [8894, 14305] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 8894-10123 bp Ori: GCN46192.1 Feature: domain Description: YesM Location: 9374-10115 bp Feature: domain Description: YesM Location: 9374-10115 bp Feature: gene Location: 10196-10384 bp Feature: gene Location: 10772-11254 bp Ori: GCN46202.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10781-11021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10781-1102 1 bp Feature: domain Description: GIIM Note: maturase Location: 11069-11249 bp Feature: domain Description: GIIM Note: maturase Location: 11069-112 49 bp Feature: gene Location: 11321-11860 bp Ori: GCN46207.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11651-11729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11651-1172 9 bp Feature: gene Location: 12346-13251 bp Feature: gene Location: 13388-14305 bp Ori: GCN46218.1 Feature: domain Description: PFLE_PFLC Location: 13424-14279 bp Feature: domain Description: PFLE_PFLC Location: 1342 4-142 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: BFIU01000157.1 Escherichia coli ECSC054 DNA, sequence157, whole genome shotgun sequence (35176 bp)
Overview 1 RT 1: 6429-12538 bp Neighborhood of RT #1 [6429, 12597] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 6429-7349 bp Ori: GCN65436.1 Feature: domain Description: AbiEii Location: 6471-7212 bp Feature: domain Description: AbiEii Location: 6471-7212 bp Feature: gene Location: 7336-8118 bp Ori: GCN65443.1 Feature: domain Description: AbiEi_3_N Location: 7348-7609 bp Feature: domain Description: AbiEi_3 _N Location: 73 48-7609 bp Feature: domain Description: AbiEi_3 Location: 7621-8077 bp Feature: domain Description: AbiEi_3 Location: 7621-8077 bp Feature: gene Location: 8434-11643 bp Ori: GCN65449.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8962-9451 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8962-9451 bp Feature: domain Description: nitrilase Location: 10957-11554 bp Feature: domain Description: nitrilase Location: 10957-11554 bp Feature: gene Location: 11990-12460 bp Feature: gene Location: 12457-12597 bp Ori: GCN65461.1 Feature: domain Description: SfsB Location: 12466-12538 bp Feature: domain Description: SfsB Location: 12466-1253 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)