myRT

myRT report for GCA_005383245.1_ASM538324v1

Download annotations/find similar RTs

Seq: BFJB01000089.1 Escherichia coli ECSC063 DNA, sequence089, whole genome shotgun sequence (25490 bp)
Overview 1 RT 1: 16242-21579 bp Neighborhood of RT #1 [16242, 21587] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 16242-17159 bp Ori: GCR55767.1 Feature: domain Description: PFLE_PFLC Location: 16278-17133 bp Feature: domain Description: PFLE_PFLC Location: 1 6278-1 71 33 bp Feature: gene Location: 17296-18201 bp Feature: gene Location: 18687-19226 bp Ori: GCR55777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19017-19095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 901 7-1 9095 bp Feature: gene Location: 19293-19775 bp Ori: GCR55784.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19302-19542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9302-1 9542 bp Feature: domain Description: GIIM Note: maturase Location: 19590-19770 bp Feature: domain Description: GIIM Note: maturase Location: 1 9590-1 9770 bp Feature: gene Location: 20097-20285 bp Feature: gene Location: 20358-21587 bp Ori: GCR55796.1 Feature: domain Description: YesM Location: 20838-21579 bp Feature: domain Description: YesM Location: 20838-21 579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: BFJB01000059.1 Escherichia coli ECSC063 DNA, sequence059, whole genome shotgun sequence (5621 bp)
Overview 1 RT 1: 53-2195 bp Neighborhood of RT #1 [53, 2233] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 53-1327 bp Ori: GCR49087.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-809 bp Feature: domain Description: GIIM Note: maturase Location: 884-1082 bp Feature: domain Description: GIIM Note: maturase Location: 884-1082 bp Feature: gene Location: 1444-1800 bp Ori: GCR49091.1 Feature: domain Description: PHA02517 Location: 1447-1756 bp Feature: domain Description: PHA02 517 Location: 1447-1756 bp Feature: gene Location: 1829-2233 bp Ori: GCR49095.1 Feature: domain Description: InsE Location: 1859-2195 bp Feature: domain Description: InsE Location: 1859-2 195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFJB01000053.1 Escherichia coli ECSC063 DNA, sequence053, whole genome shotgun sequence (59685 bp)
Overview 1 RT 1: 2278-6901 bp Neighborhood of RT #1 [2278, 6909] PRK08181 rve RVT-GII PRK10173 PRK10173 Feature: gene Location: 2278-3033 bp Ori: GCR47312.1 Feature: domain Description: PRK08181 Location: 2302-3013 bp Feature: domain Description: PRK08181 Location: 23 02-3 013 bp Feature: gene Location: 3030-4529 bp Ori: GCR47317.1 Feature: domain Description: rve Location: 3402-3795 bp Feature: domain Description: rve Location: 3 402-3 795 bp Feature: gene Location: 5623-6126 bp Ori: GCR47322.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5896-5965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5896-5965 bp Feature: gene Location: 6165-6485 bp Ori: GCR47327.1 Gene: agp_1 Feature: domain Description: PRK10173 Location: 6168-6396 bp Feature: domain Description: PRK10173 Location: 6168-63 96 bp Feature: gene Location: 6460-6909 bp Ori: GCR47331.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 6463-6901 bp Feature: domain Description: PRK10173 Location: 6463 -6901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)