myRT

myRT report for GCA_005383345.1_ASM538334v1

Download annotations/find similar RTs

Seq: BFJG01000044.1 Escherichia coli ECSC068 DNA, sequence044, whole genome shotgun sequence (20124 bp)
Overview 1 RT 1: 10608-15219 bp Neighborhood of RT #1 [10608, 15239] PRK10173 PRK10173 RVT-GII rve PRK08181 Feature: gene Location: 10608-11057 bp Ori: GCQ59183.1 Gene: agp_2 Feature: domain Description: PRK10173 Location: 10611-11049 bp Feature: domain Description: PRK1 01 73 Location: 1 061 1 -1 1 049 bp Feature: gene Location: 11032-11352 bp Ori: GCQ59191.1 Gene: agp_3 Feature: domain Description: PRK10173 Location: 11035-11263 bp Feature: domain Description: PRK1 01 73 Location: 1 1 035-1 1 263 bp Feature: gene Location: 11391-11894 bp Ori: GCQ59200.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11664-11733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 664-1 1 733 bp Feature: gene Location: 12988-14487 bp Ori: GCQ59208.1 Feature: domain Description: rve Location: 13360-13753 bp Feature: domain Description: rve Location: 1 3360-1 3753 bp Feature: gene Location: 14484-15239 bp Ori: GCQ59216.1 Feature: domain Description: PRK08181 Location: 14508-15219 bp Feature: domain Description: PRK081 81 Location: 1 4508-1 521 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665), PRK08181 (transposase; Validated)

Seq: BFJG01000060.1 Escherichia coli ECSC068 DNA, sequence060, whole genome shotgun sequence (50306 bp)
Overview 1 RT 1: 35498-40835 bp Neighborhood of RT #1 [35498, 40843] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 35498-36415 bp Ori: GCQ65725.1 Feature: domain Description: PFLE_PFLC Location: 35534-36389 bp Feature: domain Description: PFLE_PFLC Location: 35534-36389 bp Feature: gene Location: 36552-37457 bp Feature: gene Location: 37943-38482 bp Ori: GCQ65739.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38273-38351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 73-38351 bp Feature: gene Location: 38549-39031 bp Ori: GCQ65745.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38558-38798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38558-38798 bp Feature: domain Description: GIIM Note: maturase Location: 38846-39026 bp Feature: domain Description: GIIM Note: maturase Location: 38846-3902 6 bp Feature: gene Location: 39353-39541 bp Feature: gene Location: 39614-40843 bp Ori: GCQ65757.1 Feature: domain Description: YesM Location: 40094-40835 bp Feature: domain Description: YesM Location: 40094-40835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: BFJG01000120.1 Escherichia coli ECSC068 DNA, sequence120, whole genome shotgun sequence (4962 bp)
Overview 1 RT 1: 98-2312 bp Neighborhood of RT #1 [98, 2350] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 98-1444 bp Ori: GCQ79339.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194-926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194-926 bp Feature: domain Description: GIIM Note: maturase Location: 1001-1199 bp Feature: domain Description: GIIM Note: maturase Location: 1001-1199 bp Feature: gene Location: 1561-1917 bp Ori: GCQ79347.1 Feature: domain Description: PHA02517 Location: 1564-1873 bp Feature: domain Description: PHA02517 Location: 1564-1873 bp Feature: gene Location: 1946-2350 bp Ori: GCQ79356.1 Feature: domain Description: InsE Location: 1976-2312 bp Feature: domain Description: InsE Location: 1976-23 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)