myRT

myRT report for GCA_005383505.1_ASM538350v1

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Seq: BFJO01000150.1 Escherichia coli ECSC078 DNA, sequence150, whole genome shotgun sequence (56307 bp)
Overview 1 RT 1: 48488-53218 bp Neighborhood of RT #1 [48488, 53218] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM rve Feature: gene Location: 48488-48835 bp Feature: domain Description: TnpB_IS66 Location: 48515-48806 bp Feature: domain Description: TnpB_IS66 Location: 4851 5-48806 bp Feature: gene Location: 48855-50294 bp Feature: domain Description: LZ_Tnp_IS66 Location: 48993-49218 bp Feature: domain Description: LZ_Tnp_IS66 Location: 48993-4921 8 bp Feature: domain Description: zf-IS66 Location: 49239-49371 bp Feature: domain Description: zf-IS66 Location: 49239-49371 bp Feature: domain Description: DDE_Tnp_IS66 Location: 49416-50253 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4941 6-50253 bp Feature: gene Location: 50756-51988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50957-51 61 1 bp Feature: domain Description: GIIM Note: maturase Location: 51689-51911 bp Feature: domain Description: GIIM Note: maturase Location: 51 689-51 91 1 bp Feature: gene Location: 52326-53018 bp Feature: domain Description: rve Location: 52461-52827 bp Feature: domain Description: rve Location: 52461 -52827 bp Feature: gene Location: 53042-53218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), rve (pfam00665)

Seq: BFJO01000039.1 Escherichia coli ECSC078 DNA, sequence039, whole genome shotgun sequence (75535 bp)
Overview 1 RT 1: 1130-3867 bp Neighborhood of RT #1 [1130, 4130] RVT-GII DEXQc_UvrD DEXQc_UvrD YbjD YbjD Feature: gene Location: 1130-2074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1460-1979 bp Feature: gene Location: 1939-2580 bp Feature: domain Description: DEXQc_UvrD Location: 1951-2170 bp Feature: domain Description: DEXQc_UvrD Location: 1951-2 170 bp Feature: domain Description: DEXQc_UvrD Location: 2308-2449 bp Feature: domain Description: DEXQc_UvrD Location: 2 308-2 449 bp Feature: gene Location: 2565-4130 bp Feature: domain Description: YbjD Location: 2577-2718 bp Feature: domain Description: YbjD Location: 2 577-2 718 bp Feature: domain Description: YbjD Location: 3390-3867 bp Feature: domain Description: YbjD Location: 3390-3867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DEXQc_UvrD (cd17932), YbjD (COG3593)