myRT

myRT report for GCA_005383685.1_ASM538368v1

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Seq: BFJX01000021.1 Escherichia coli HH-NP013 DNA, sequence21, whole genome shotgun sequence (20489 bp)
Overview 1 RT 1: 766-9187 bp Neighborhood of RT #1 [766, 9189] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII YhhI YhhI YhhI PRK01271 Feature: gene Location: 766-4971 bp Feature: domain Description: PAAR_2 Location: 772-853 bp Feature: domain Description: PAAR_2 Location: 772-853 bp Feature: domain Description: RhsA Location: 1351-1780 bp Feature: domain Description: RhsA Location: 1 351 -1 780 bp Feature: domain Description: RHS_repeat Location: 1861-1951 bp Feature: domain Description: RHS_repeat Location: 1 861 -1 951 bp Feature: domain Description: RhsA Location: 2020-2359 bp Feature: domain Description: RhsA Location: 2020-2359 bp Feature: domain Description: RhsA Location: 2383-4537 bp Feature: domain Description: RhsA Location: 2383-4537 bp Feature: gene Location: 4972-5370 bp Feature: gene Location: 6009-6893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6285-6876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6285-6876 bp Feature: gene Location: 7533-8651 bp Feature: domain Description: YhhI Location: 7536-7881 bp Feature: domain Description: YhhI Location: 7536-7881 bp Feature: domain Description: YhhI Location: 7938-8292 bp Feature: domain Description: YhhI Location: 7938-8292 bp Feature: domain Description: YhhI Location: 8313-8553 bp Feature: domain Description: YhhI Location: 831 3-8553 bp Feature: gene Location: 8962-9189 bp Feature: domain Description: PRK01271 Location: 8965-9187 bp Feature: domain Description: PRK01 271 Location: 8965-91 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YhhI (COG5433), PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593)