myRT

myRT report for GCA_005383785.1_ASM538378v1

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Seq: BFKC01000042.1 Escherichia coli HH-NP023 DNA, sequence42, whole genome shotgun sequence (36874 bp)
Overview 1 RT 1: 6288-9775 bp Neighborhood of RT #1 [6288, 9789] Ntox28 CdiI_3 RVT-GII RVT-GII GIIM ArgR Feature: gene Location: 6288-6485 bp Ori: GCP90025.1 Feature: domain Description: Ntox28 Location: 6294-6411 bp Feature: domain Description: Ntox28 Location: 6294-641 1 bp Feature: gene Location: 6482-6868 bp Ori: GCP90030.1 Feature: domain Description: CdiI_3 Location: 6506-6782 bp Feature: domain Description: CdiI_3 Location: 6506-6782 bp Feature: gene Location: 7316-7798 bp Ori: GCP90034.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7637-7724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7637-7724 bp Feature: gene Location: 7795-8607 bp Ori: GCP90039.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7804-8254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7804-8254 bp Feature: domain Description: GIIM Note: maturase Location: 8305-8470 bp Feature: domain Description: GIIM Note: maturase Location: 8305-8470 bp Feature: gene Location: 8857-9075 bp Feature: gene Location: 9313-9789 bp Ori: GCP90049.1 Feature: domain Description: ArgR Location: 9343-9775 bp Feature: domain Description: ArgR Location: 9343-9775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ntox28 (pfam15605), CdiI_3 (pfam18616), RVT-GII, GIIM (pfam08388), ArgR (COG1438)

Seq: BFKC01000010.1 Escherichia coli HH-NP023 DNA, sequence10, whole genome shotgun sequence (192309 bp)
Overview 1 RT 1: 57450-63682 bp Neighborhood of RT #1 [57450, 63682] Phage_int_SAM_2 Integrase_1 RVT-Retrons HTH_XRE ImmA HTH_XRE Feature: gene Location: 57450-58262 bp Ori: GCS23272.1 Feature: domain Description: Phage_int_SAM_2 Location: 57453-57720 bp Feature: domain Description: Phage_int_SAM_2 Location: 57453-5772 0 bp Feature: domain Description: Integrase_1 Location: 57759-58200 bp Feature: domain Description: Integrase_1 Location: 57759-582 00 bp Feature: gene Location: 59217-60443 bp Feature: gene Location: 60646-61791 bp Ori: GCS23274.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60886-61519 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60886-61519 bp Feature: gene Location: 61934-63061 bp Ori: GCS23275.1 Feature: domain Description: HTH_XRE Location: 61955-62126 bp Feature: domain Description: HTH_XRE Location: 61955-62 12 6 bp Feature: domain Description: ImmA Location: 62339-62861 bp Feature: domain Description: ImmA Location: 62 339-62 861 bp Feature: domain Description: HTH_XRE Location: 62918-62990 bp Feature: domain Description: HTH_XRE Location: 62 918-62 990 bp Feature: gene Location: 63065-63682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835), RVT-Retrons, HTH_XRE (smart00530), ImmA (COG2856)