myRT

myRT report for GCA_005384325.1_ASM538432v1

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Seq: BFLD01000004.1 Escherichia coli HUST151 DNA, sequence04, whole genome shotgun sequence (29137 bp)
Overview 1 RT 1: 21952-25189 bp Neighborhood of RT #1 [21952, 25254] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 21952-22356 bp Feature: domain Description: InsE Location: 21982-22318 bp Feature: domain Description: InsE Location: 21 982-2231 8 bp Feature: gene Location: 22385-22741 bp Feature: domain Description: PHA02517 Location: 22388-22697 bp Feature: domain Description: PHA0251 7 Location: 22388-22697 bp Feature: gene Location: 22858-24381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23131-23863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 31 -23863 bp Feature: domain Description: GIIM Note: maturase Location: 23938-24136 bp Feature: domain Description: GIIM Note: maturase Location: 23938-241 36 bp Feature: gene Location: 24335-24760 bp Feature: gene Location: 24973-25254 bp Feature: domain Description: PHA02517 Location: 24979-25189 bp Feature: domain Description: PHA0251 7 Location: 24979-251 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BFLD01000006.1 Escherichia coli HUST151 DNA, sequence06, whole genome shotgun sequence (555475 bp)
Overview 1 RT 1: 98902-104811 bp Neighborhood of RT #1 [98902, 104811] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98902-99357 bp Feature: gene Location: 100238-100747 bp Feature: domain Description: HTH_36 Location: 100424-100580 bp Feature: domain Description: HTH_36 Location: 10042 4-100580 bp Feature: gene Location: 100955-102454 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101387-101843 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101387-101843 bp Feature: gene Location: 102855-104192 bp Feature: domain Description: DUF4062 Location: 102888-103131 bp Feature: domain Description: DUF4062 Location: 102 888-103131 bp Feature: gene Location: 104230-104811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLD01000018.1 Escherichia coli HUST151 DNA, sequence18, whole genome shotgun sequence (408559 bp)
Overview 1 RT 1: 114803-120436 bp Neighborhood of RT #1 [114803, 120489] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 114803-115168 bp Feature: gene Location: 115816-117309 bp Feature: domain Description: PRK13889 Location: 115819-116419 bp Feature: domain Description: PRK13 889 Location: 115819-116419 bp Feature: gene Location: 117447-118931 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 117810-118218 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 117810-118218 bp Feature: gene Location: 119060-119593 bp Feature: gene Location: 120001-120489 bp Feature: domain Description: DUF4755 Location: 120133-120436 bp Feature: domain Description: DUF4755 Location: 12013 3 -12043 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BFLD01000021.1 Escherichia coli HUST151 DNA, sequence21, whole genome shotgun sequence (67933 bp)
Overview 1 RT 1: 66827-67769 bp Neighborhood of RT #1 [66827, 67930] PRK10173 PRK10173 RVT-GII Feature: gene Location: 66827-67276 bp Feature: domain Description: PRK10173 Location: 66830-67268 bp Feature: domain Description: PRK10173 Location: 66830-67268 bp Feature: gene Location: 67260-67571 bp Feature: domain Description: PRK10173 Location: 67263-67482 bp Feature: domain Description: PRK10173 Location: 67263-674 82 bp Feature: gene Location: 67610-67930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67700-67769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67700-67769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII