myRT

myRT report for GCA_005384385.1_ASM538438v1

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Seq: BFLG01000006.1 Escherichia coli HUST161 DNA, sequence06, whole genome shotgun sequence (28200 bp)
Overview 1 RT 1: 3-2349 bp Neighborhood of RT #1 [3, 2387] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 3-1481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 -963 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1 038-1 236 bp Feature: gene Location: 1598-1954 bp Feature: domain Description: PHA02517 Location: 1601-1910 bp Feature: domain Description: PHA0251 7 Location: 1 601 -1 91 0 bp Feature: gene Location: 1983-2387 bp Feature: domain Description: InsE Location: 2013-2349 bp Feature: domain Description: InsE Location: 201 3-2349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFLG01000020.1 Escherichia coli HUST161 DNA, sequence20, whole genome shotgun sequence (394757 bp)
Overview 1 RT 1: 98493-104402 bp Neighborhood of RT #1 [98493, 104402] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98493-98948 bp Feature: gene Location: 99829-100338 bp Feature: domain Description: HTH_36 Location: 100015-100171 bp Feature: domain Description: HTH_36 Location: 100015-100171 bp Feature: gene Location: 100546-102045 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100978-101434 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100978-101434 bp Feature: gene Location: 102446-103783 bp Feature: domain Description: DUF4062 Location: 102479-102722 bp Feature: domain Description: DUF4062 Location: 102 479-102 72 2 bp Feature: gene Location: 103821-104402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLG01000036.1 Escherichia coli HUST161 DNA, sequence36, whole genome shotgun sequence (947419 bp)
Overview 1 RT 1: 285302-290935 bp Neighborhood of RT #1 [285302, 290988] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 285302-285667 bp Feature: gene Location: 286315-287808 bp Feature: domain Description: PRK13889 Location: 286318-286918 bp Feature: domain Description: PRK13 889 Location: 2863 18-286918 bp Feature: gene Location: 287946-289430 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 288309-288717 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2883 09-288717 bp Feature: gene Location: 289559-290092 bp Feature: gene Location: 290500-290988 bp Feature: domain Description: DUF4755 Location: 290632-290935 bp Feature: domain Description: DUF4755 Location: 29063 2-29093 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BFLG01000037.1 Escherichia coli HUST161 DNA, sequence37, whole genome shotgun sequence (18698 bp)
Overview 1 RT 1: 13849-16994 bp Neighborhood of RT #1 [13849, 17728] PRK10173 PRK10173 RVT-GII rve Feature: gene Location: 13849-14298 bp Feature: domain Description: PRK10173 Location: 13852-14290 bp Feature: domain Description: PRK10173 Location: 13852-14 290 bp Feature: gene Location: 14282-14593 bp Feature: domain Description: PRK10173 Location: 14285-14504 bp Feature: domain Description: PRK10173 Location: 14 285-14 504 bp Feature: gene Location: 14632-15135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14905-14974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 905-14 974 bp Feature: gene Location: 15766-15984 bp Feature: gene Location: 16229-17728 bp Feature: domain Description: rve Location: 16601-16994 bp Feature: domain Description: rve Location: 16601-16994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, rve (pfam00665)