myRT

myRT report for GCA_005384405.1_ASM538440v1

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Seq: BFLH01000066.1 Escherichia coli HUST163 DNA, sequence66, whole genome shotgun sequence (29345 bp)
Overview 1 RT 1: 21371-27213 bp Neighborhood of RT #1 [21371, 27248] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 21371-21649 bp Ori: GCU15757.1 Feature: domain Description: DUF5339 Location: 21434-21635 bp Feature: domain Description: DUF5339 Location: 21 434-21 635 bp Feature: gene Location: 21987-23018 bp Ori: GCU15759.1 Gene: iaaA_2 Feature: domain Description: Asparaginase_2 Location: 22077-23010 bp Feature: domain Description: Asparaginase_2 Location: 22077-2301 0 bp Feature: gene Location: 23542-23988 bp Ori: GCU15761.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23848-23950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23848-23950 bp Feature: gene Location: 24634-25995 bp Ori: GCU15764.1 Gene: dcuD_2 Feature: domain Description: DcuC Location: 24637-25969 bp Feature: domain Description: DcuC Location: 24637-25969 bp Feature: gene Location: 25992-27248 bp Ori: GCU15766.1 Gene: pepT_2 Feature: domain Description: PRK13381 Location: 25998-27213 bp Feature: domain Description: PRK1 3381 Location: 25998-2721 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5339 (pfam17274), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)

Seq: BFLH01000016.1 Escherichia coli HUST163 DNA, sequence16, whole genome shotgun sequence (166535 bp)
Overview 1 RT 1: 137775-143884 bp Neighborhood of RT #1 [137775, 143943] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 137775-138695 bp Ori: GCU09268.1 Feature: domain Description: AbiEii Location: 137817-138558 bp Feature: domain Description: AbiEii Location: 137817-138558 bp Feature: gene Location: 138682-139464 bp Ori: GCU09269.1 Feature: domain Description: AbiEi_3_N Location: 138694-138955 bp Feature: domain Description: AbiEi_3_N Location: 138694-138955 bp Feature: domain Description: AbiEi_3 Location: 138967-139423 bp Feature: domain Description: AbiEi_3 Location: 138967-13942 3 bp Feature: gene Location: 139780-142989 bp Ori: GCU09270.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140308-140797 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140308-140797 bp Feature: domain Description: nitrilase Location: 142303-142900 bp Feature: domain Description: nitrilase Location: 142 303-142 900 bp Feature: gene Location: 143336-143806 bp Feature: gene Location: 143803-143943 bp Ori: GCU09272.1 Feature: domain Description: SfsB Location: 143812-143884 bp Feature: domain Description: SfsB Location: 143812 -143884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)