myRT

myRT report for GCA_005384425.1_ASM538442v1

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Seq: BFLI01000014.1 Escherichia coli HUST164 DNA, sequence14, whole genome shotgun sequence (738094 bp)
Overview 1 RT 1: 98583-104492 bp Neighborhood of RT #1 [98583, 104492] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98583-99038 bp Feature: gene Location: 99919-100428 bp Feature: domain Description: HTH_36 Location: 100105-100261 bp Feature: domain Description: HTH_36 Location: 1 001 05-1 00261 bp Feature: gene Location: 100636-102135 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101068-101524 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 01 068-1 01 524 bp Feature: gene Location: 102536-103873 bp Feature: domain Description: DUF4062 Location: 102569-102812 bp Feature: domain Description: DUF4062 Location: 1 02569-1 0281 2 bp Feature: gene Location: 103911-104492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLI01000016.1 Escherichia coli HUST164 DNA, sequence16, whole genome shotgun sequence (54468 bp)
Overview 1 RT 1: 2-1106 bp Neighborhood of RT #1 [2, 1114] RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-170 bp Feature: gene Location: 370-681 bp Feature: domain Description: PRK10173 Location: 373-592 bp Feature: domain Description: PRK10173 Location: 373-592 bp Feature: gene Location: 665-1114 bp Feature: domain Description: PRK10173 Location: 668-1106 bp Feature: domain Description: PRK10173 Location: 668-1106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: BFLI01000021.1 Escherichia coli HUST164 DNA, sequence21, whole genome shotgun sequence (27301 bp)
Overview 1 RT 1: 2-2219 bp Neighborhood of RT #1 [2, 2257] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 2-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101-83 3 bp Feature: domain Description: GIIM Note: maturase Location: 908-1106 bp Feature: domain Description: GIIM Note: maturase Location: 908-1106 bp Feature: gene Location: 1468-1824 bp Feature: domain Description: PHA02517 Location: 1471-1780 bp Feature: domain Description: PHA02517 Location: 1471-1780 bp Feature: gene Location: 1853-2257 bp Feature: domain Description: InsE Location: 1883-2219 bp Feature: domain Description: InsE Location: 1883 -2219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFLI01000029.1 Escherichia coli HUST164 DNA, sequence29, whole genome shotgun sequence (599892 bp)
Overview 1 RT 1: 77950-83583 bp Neighborhood of RT #1 [77950, 83636] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 77950-78315 bp Feature: gene Location: 78963-80456 bp Feature: domain Description: PRK13889 Location: 78966-79566 bp Feature: domain Description: PRK13889 Location: 78966-79566 bp Feature: gene Location: 80594-82078 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 80957-81365 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 80957-81365 bp Feature: gene Location: 82207-82740 bp Feature: gene Location: 83148-83636 bp Feature: domain Description: DUF4755 Location: 83280-83583 bp Feature: domain Description: DUF4 755 Location: 83280-83583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)