myRT

myRT report for GCA_005384525.1_ASM538452v1

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Seq: BFLN01000094.1 Escherichia coli HUST171 DNA, sequence094, whole genome shotgun sequence (237425 bp)
Overview 1 RT 1: 142936-148955 bp Neighborhood of RT #1 [142936, 148963] DUF5405 Phage_GPA RVT-Retrons ABC_ATPase Q Feature: gene Location: 142936-143211 bp Ori: GCT38197.1 Feature: domain Description: DUF5405 Location: 142954-143194 bp Feature: domain Description: DUF5405 Location: 1 42954-1 431 94 bp Feature: gene Location: 143201-145471 bp Ori: GCT38200.1 Feature: domain Description: Phage_GPA Location: 143600-144587 bp Feature: domain Description: Phage_GPA Location: 1 43600-1 44587 bp Feature: gene Location: 145798-146787 bp Ori: GCT38203.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145915-146476 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4591 5-1 46476 bp Feature: gene Location: 146789-148141 bp Ori: GCT38206.1 Gene: btuD_1 Feature: domain Description: ABC_ATPase Location: 146849-147572 bp Feature: domain Description: ABC_ATPase Location: 1 46849-1 47572 bp Feature: gene Location: 148472-148963 bp Ori: GCT38209.1 Feature: domain Description: Q Location: 148475-148955 bp Feature: domain Description: Q Location: 1 48475-1 48955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)

Seq: BFLN01000117.1 Escherichia coli HUST171 DNA, sequence117, whole genome shotgun sequence (13911 bp)
Overview 1 RT 1: 3094-8196 bp Neighborhood of RT #1 [3094, 8196] DnaJ_CXXCXGXG RVT-GII GIIM PRK06526 Feature: gene Location: 3094-4290 bp Feature: gene Location: 4365-4628 bp Ori: GCT40688.1 Gene: dnaJ_2 Feature: domain Description: DnaJ_CXXCXGXG Location: 4383-4545 bp Feature: domain Description: DnaJ_CXXCXGXG Location: 4383-4545 bp Feature: gene Location: 5148-6671 bp Ori: GCT40691.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5421-6153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542 1-6153 bp Feature: domain Description: GIIM Note: maturase Location: 6228-6426 bp Feature: domain Description: GIIM Note: maturase Location: 62 2 8-642 6 bp Feature: gene Location: 7564-7950 bp Ori: GCT40695.1 Feature: domain Description: PRK06526 Location: 7588-7906 bp Feature: domain Description: PRK0652 6 Location: 7588-7906 bp Feature: gene Location: 7996-8196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaJ_CXXCXGXG (pfam00684), RVT-GII, GIIM (pfam08388), PRK06526 (transposase; Provisional)