myRT

myRT report for GCA_005384625.1_ASM538462v1

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Seq: BFLS01000022.1 Escherichia coli HUST177 DNA, sequence22, whole genome shotgun sequence (504104 bp)
Overview 1 RT 1: 59466-65099 bp Neighborhood of RT #1 [59466, 65152] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 59466-59831 bp Feature: gene Location: 60479-61972 bp Feature: domain Description: PRK13889 Location: 60482-61082 bp Feature: domain Description: PRK1 3889 Location: 60482-61 082 bp Feature: gene Location: 62110-63594 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 62473-62881 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 62473-62881 bp Feature: gene Location: 63723-64256 bp Feature: gene Location: 64664-65152 bp Feature: domain Description: DUF4755 Location: 64796-65099 bp Feature: domain Description: DUF4755 Location: 64796-65099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BFLS01000033.1 Escherichia coli HUST177 DNA, sequence33, whole genome shotgun sequence (738474 bp)
Overview 1 RT 1: 98747-104656 bp Neighborhood of RT #1 [98747, 104656] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98747-99202 bp Feature: gene Location: 100083-100592 bp Feature: domain Description: HTH_36 Location: 100269-100425 bp Feature: domain Description: HTH_36 Location: 1002 69-10042 5 bp Feature: gene Location: 100800-102299 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101232-101688 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1012 32 -101688 bp Feature: gene Location: 102700-104037 bp Feature: domain Description: DUF4062 Location: 102733-102976 bp Feature: domain Description: DUF4062 Location: 102 733-102 976 bp Feature: gene Location: 104075-104656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLS01000052.1 Escherichia coli HUST177 DNA, sequence52, whole genome shotgun sequence (30834 bp)
Overview 1 RT 1: 11519-13613 bp Neighborhood of RT #1 [11519, 13678] PRK10173 PRK10173 RVT-GII PHA02517 Feature: gene Location: 11519-11968 bp Feature: domain Description: PRK10173 Location: 11522-11960 bp Feature: domain Description: PRK10173 Location: 11522-11960 bp Feature: gene Location: 11952-12263 bp Feature: domain Description: PRK10173 Location: 11955-12174 bp Feature: domain Description: PRK10173 Location: 11955-12174 bp Feature: gene Location: 12302-12805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12575-12644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12575-12644 bp Feature: gene Location: 12759-13184 bp Feature: gene Location: 13397-13678 bp Feature: domain Description: PHA02517 Location: 13403-13613 bp Feature: domain Description: PHA02517 Location: 13 403 -13 613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)