myRT

myRT report for GCA_005384645.1_ASM538464v1

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Seq: BFLT01000002.1 Escherichia coli HUST181 DNA, sequence02, whole genome shotgun sequence (811922 bp)
Overview 1 RT 1: 553674-559307 bp Neighborhood of RT #1 [553674, 559360] PRK13889 RVT-UG16 DUF4755 Feature: gene Location: 553674-554039 bp Feature: gene Location: 554687-556180 bp Feature: domain Description: PRK13889 Location: 554690-555290 bp Feature: domain Description: PRK1 3889 Location: 554690-555290 bp Feature: gene Location: 556318-557802 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 556681-557089 bp Feature: RT Description: RVT-UG1 6 Note: UG1 6 RT Location: 556681 -557089 bp Feature: gene Location: 557931-558464 bp Feature: gene Location: 558872-559360 bp Feature: domain Description: DUF4755 Location: 559004-559307 bp Feature: domain Description: DUF4755 Location: 559004-559307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16, DUF4755 (pfam15947)

Seq: BFLT01000007.1 Escherichia coli HUST181 DNA, sequence07, whole genome shotgun sequence (209680 bp)
Overview 1 RT 1: 98610-104519 bp Neighborhood of RT #1 [98610, 104519] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98610-99065 bp Feature: gene Location: 99946-100455 bp Feature: domain Description: HTH_36 Location: 100132-100288 bp Feature: domain Description: HTH_36 Location: 100132 -1002 88 bp Feature: gene Location: 100663-102162 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101095-101551 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101095-101551 bp Feature: gene Location: 102563-103900 bp Feature: domain Description: DUF4062 Location: 102596-102839 bp Feature: domain Description: DUF4062 Location: 102 596-102 839 bp Feature: gene Location: 103938-104519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLT01000009.1 Escherichia coli HUST181 DNA, sequence09, whole genome shotgun sequence (12894 bp)
Overview 1 RT 1: 11775-12732 bp Neighborhood of RT #1 [11775, 12893] PRK10173 PRK10173 RVT-GII Feature: gene Location: 11775-12224 bp Feature: domain Description: PRK10173 Location: 11778-12216 bp Feature: domain Description: PRK10173 Location: 11778-12216 bp Feature: gene Location: 12208-12519 bp Feature: domain Description: PRK10173 Location: 12211-12430 bp Feature: domain Description: PRK10173 Location: 12211-1243 0 bp Feature: gene Location: 12558-12893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12663-12732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12663 -1273 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: BFLT01000013.1 Escherichia coli HUST181 DNA, sequence13, whole genome shotgun sequence (28466 bp)
Overview 1 RT 1: 26204-28220 bp Neighborhood of RT #1 [26204, 28465] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 26204-26608 bp Feature: domain Description: InsE Location: 26234-26570 bp Feature: domain Description: InsE Location: 26234 -26570 bp Feature: gene Location: 26637-26993 bp Feature: domain Description: PHA02517 Location: 26640-26949 bp Feature: domain Description: PHA02517 Location: 2664 0-2694 9 bp Feature: gene Location: 27110-28465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27215-27947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27215-2794 7 bp Feature: domain Description: GIIM Note: maturase Location: 28022-28220 bp Feature: domain Description: GIIM Note: maturase Location: 28022-28220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)