myRT

myRT report for GCA_005384725.1_ASM538472v1

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Seq: BFLX01000021.1 Escherichia coli HUST186 DNA, sequence21, whole genome shotgun sequence (14379 bp)
Overview 1 RT 1: 13167-14217 bp Neighborhood of RT #1 [13167, 14378] PRK10173 PRK10173 RVT-GII Feature: gene Location: 13167-13616 bp Feature: domain Description: PRK10173 Location: 13170-13608 bp Feature: domain Description: PRK1 01 73 Location: 1 31 70-1 3608 bp Feature: gene Location: 13600-13911 bp Feature: domain Description: PRK10173 Location: 13603-13822 bp Feature: domain Description: PRK1 01 73 Location: 1 3603-1 3822 bp Feature: gene Location: 13950-14378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14148-14217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 48-1 421 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: BFLX01000031.1 Escherichia coli HUST186 DNA, sequence31, whole genome shotgun sequence (737956 bp)
Overview 1 RT 1: 98209-104118 bp Neighborhood of RT #1 [98209, 104118] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 98209-98664 bp Feature: gene Location: 99545-100054 bp Feature: domain Description: HTH_36 Location: 99731-99887 bp Feature: domain Description: HTH_36 Location: 99731-99887 bp Feature: gene Location: 100262-101761 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100694-101150 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 100694-101150 bp Feature: gene Location: 102162-103499 bp Feature: domain Description: DUF4062 Location: 102195-102438 bp Feature: domain Description: DUF4062 Location: 102 195-102 438 bp Feature: gene Location: 103537-104118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFLX01000037.1 Escherichia coli HUST186 DNA, sequence37, whole genome shotgun sequence (1040859 bp)
Overview 1 RT 1: 433356-438146 bp Neighborhood of RT #1 [433356, 438146] PRK13889 RVT-UG16 Feature: gene Location: 433356-433721 bp Feature: gene Location: 434369-435862 bp Feature: domain Description: PRK13889 Location: 434372-434972 bp Feature: domain Description: PRK13 889 Location: 43 43 72-43 4972 bp Feature: gene Location: 436000-436722 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 436363-436720 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 43 63 63 -43 6720 bp Feature: gene Location: 436780-437484 bp Feature: gene Location: 437613-438146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-UG16

Seq: BFLX01000042.1 Escherichia coli HUST186 DNA, sequence42, whole genome shotgun sequence (42550 bp)
Overview 1 RT 1: 13451-16924 bp Neighborhood of RT #1 [13451, 16962] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 13451-13612 bp Feature: gene Location: 13660-13941 bp Feature: domain Description: PHA02517 Location: 13666-13876 bp Feature: domain Description: PHA02517 Location: 13666-13876 bp Feature: gene Location: 14533-16056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14806-15538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 806-15538 bp Feature: domain Description: GIIM Note: maturase Location: 15613-15811 bp Feature: domain Description: GIIM Note: maturase Location: 15613-15811 bp Feature: gene Location: 16173-16529 bp Feature: domain Description: PHA02517 Location: 16176-16485 bp Feature: domain Description: PHA02517 Location: 16176-164 85 bp Feature: gene Location: 16558-16962 bp Feature: domain Description: InsE Location: 16588-16924 bp Feature: domain Description: InsE Location: 16588-16924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)