myRT

myRT report for GCA_005385665.1_ASM538566v1

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Seq: BFNS01000010.1 Escherichia coli JML051 DNA, sequence10, whole genome shotgun sequence (293908 bp)
Overview 1 RT 1: 51-4624 bp Neighborhood of RT #1 [51, 4624] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 51-560 bp Ori: GCW02392.1 Feature: domain Description: HTH_36 Location: 237-393 bp Feature: domain Description: HTH_36 Location: 237-393 bp Feature: gene Location: 768-2267 bp Ori: GCW02394.1 Gene: CorA Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1200-1656 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 200-1 656 bp Feature: gene Location: 2668-3993 bp Ori: GCW02396.1 Feature: domain Description: DUF4062 Location: 2689-2932 bp Feature: domain Description: DUF4062 Location: 2689-2932 bp Feature: gene Location: 4043-4624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: BFNS01000024.1 Escherichia coli JML051 DNA, sequence24, whole genome shotgun sequence (28215 bp)
Overview 1 RT 1: 56-2198 bp Neighborhood of RT #1 [56, 2236] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 56-1330 bp Ori: GCW06246.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80-812 bp Feature: domain Description: GIIM Note: maturase Location: 887-1085 bp Feature: domain Description: GIIM Note: maturase Location: 887-1085 bp Feature: gene Location: 1447-1803 bp Ori: GCW06248.1 Feature: domain Description: PHA02517 Location: 1450-1759 bp Feature: domain Description: PHA02 517 Location: 1450-1759 bp Feature: gene Location: 1832-2236 bp Ori: GCW06250.1 Feature: domain Description: InsE Location: 1862-2198 bp Feature: domain Description: InsE Location: 1862 -2 198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: BFNS01000002.1 Escherichia coli JML051 DNA, sequence02, whole genome shotgun sequence (577760 bp)
Overview 1 RT 1: 112909-117886 bp Neighborhood of RT #1 [112909, 117886] RVT-UG16 PRK13889 Feature: gene Location: 112909-113163 bp Feature: gene Location: 113108-113629 bp Feature: gene Location: 113758-115242 bp Ori: GCW00754.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 114121-114529 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 114121-114529 bp Feature: gene Location: 115380-116873 bp Ori: GCW00756.1 Feature: domain Description: PRK13889 Location: 115383-115983 bp Feature: domain Description: PRK13 889 Location: 1153 83 -115983 bp Feature: gene Location: 117521-117886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, PRK13889 (conjugal transfer relaxase TraA; Provisional)