myRT

myRT report for GCA_005385885.1_ASM538588v1

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Seq: BFOD01000288.1 Escherichia coli JML062 DNA, sequence288, whole genome shotgun sequence (8270 bp)
Overview 1 RT 1: 30-4313 bp Neighborhood of RT #1 [30, 4321] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 30-935 bp Feature: gene Location: 1421-1960 bp Ori: GCW49589.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1751-1829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 751 -1 829 bp Feature: gene Location: 2027-2509 bp Ori: GCW49597.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2036-2276 bp Feature: domain Description: GIIM Note: maturase Location: 2324-2504 bp Feature: domain Description: GIIM Note: maturase Location: 2324-2504 bp Feature: gene Location: 2831-3019 bp Feature: gene Location: 3092-4321 bp Ori: GCW49608.1 Feature: domain Description: YesM Location: 3572-4313 bp Feature: domain Description: YesM Location: 3572-431 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: BFOD01000261.1 Escherichia coli JML062 DNA, sequence261, whole genome shotgun sequence (14013 bp)
Overview 1 RT 1: 736-6599 bp Neighborhood of RT #1 [736, 6613] PRK13381 DcuC RVT-GII Asparaginase_2 DUF5339 Feature: gene Location: 736-1992 bp Ori: GCW45874.1 Gene: pepT_2 Feature: domain Description: PRK13381 Location: 742-1957 bp Feature: domain Description: PRK13381 Location: 742 -1957 bp Feature: gene Location: 1989-3350 bp Ori: GCW45882.1 Gene: dcuD_1 Feature: domain Description: DcuC Location: 1992-3324 bp Feature: domain Description: DcuC Location: 1992 -332 4 bp Feature: gene Location: 3996-4442 bp Ori: GCW45890.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4302-4404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4302 -4404 bp Feature: gene Location: 4966-5997 bp Ori: GCW45894.1 Gene: iaaA_2 Feature: domain Description: Asparaginase_2 Location: 5056-5989 bp Feature: domain Description: Asparaginase_2 Location: 5056-5989 bp Feature: gene Location: 6335-6613 bp Ori: GCW45901.1 Feature: domain Description: DUF5339 Location: 6398-6599 bp Feature: domain Description: DUF5339 Location: 6398-6599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13381 (peptidase T; Provisional), DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), DUF5339 (pfam17274)

Seq: BFOD01000056.1 Escherichia coli JML062 DNA, sequence056, whole genome shotgun sequence (35157 bp)
Overview 1 RT 1: 6429-12538 bp Neighborhood of RT #1 [6429, 12597] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 6429-7349 bp Ori: GCW19521.1 Feature: domain Description: AbiEii Location: 6471-7212 bp Feature: domain Description: AbiEii Location: 6471-7212 bp Feature: gene Location: 7336-8118 bp Ori: GCW19526.1 Feature: domain Description: AbiEi_3_N Location: 7348-7609 bp Feature: domain Description: AbiEi_3 _N Location: 73 48-7609 bp Feature: domain Description: AbiEi_3 Location: 7621-8077 bp Feature: domain Description: AbiEi_3 Location: 7621-8077 bp Feature: gene Location: 8434-11643 bp Ori: GCW19530.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8962-9451 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8962-9451 bp Feature: domain Description: nitrilase Location: 10957-11554 bp Feature: domain Description: nitrilase Location: 10957-11554 bp Feature: gene Location: 11990-12460 bp Feature: gene Location: 12457-12597 bp Ori: GCW19541.1 Feature: domain Description: SfsB Location: 12466-12538 bp Feature: domain Description: SfsB Location: 12466-1253 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423)