myRT

myRT report for GCA_005388965.1_ASM538896v1

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Seq: BFTZ01000013.1 (248604 bp)
Overview 1 RT 1: 232777-241361 bp Neighborhood of RT #1 [232777, 241603] AidA AidA YeeP RVT-UG1 GerD Feature: gene Location: 232777-235698 bp Feature: domain Description: AidA Location: 232891-234853 bp Feature: domain Description: AidA Location: 232891 -234853 bp Feature: domain Description: AidA Location: 234892-235306 bp Feature: domain Description: AidA Location: 234892-235306 bp Feature: gene Location: 235996-236868 bp Feature: domain Description: YeeP Location: 235999-236866 bp Feature: domain Description: YeeP Location: 235999-236866 bp Feature: gene Location: 237472-239943 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 238084-238594 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 238084-238594 bp Feature: gene Location: 240045-241160 bp Feature: gene Location: 241169-241603 bp Feature: domain Description: GerD Location: 241247-241361 bp Feature: domain Description: GerD Location: 241 247-241 361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: BFTZ01000004.1 (62762 bp)
Overview 1 RT 1: 56938-60747 bp Neighborhood of RT #1 [56938, 60747] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 56938-57240 bp Feature: domain Description: InsE Location: 56947-57229 bp Feature: domain Description: InsE Location: 56947-572 2 9 bp Feature: gene Location: 57267-57692 bp Feature: domain Description: PHA02517 Location: 57291-57627 bp Feature: domain Description: PHA02 517 Location: 572 91-5762 7 bp Feature: gene Location: 58284-59807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58557-59289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58557-592 89 bp Feature: domain Description: GIIM Note: maturase Location: 59364-59562 bp Feature: domain Description: GIIM Note: maturase Location: 59364-59562 bp Feature: gene Location: 59984-60283 bp Feature: domain Description: PHA02517 Location: 59987-60281 bp Feature: domain Description: PHA02 517 Location: 59987-602 81 bp Feature: gene Location: 60598-60747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BFTZ01000048.1 (113080 bp)
Overview 1 RT 1: 59183-63124 bp Neighborhood of RT #1 [59183, 63124] RVT-Retrons Feature: gene Location: 59183-60322 bp Feature: gene Location: 60368-60535 bp Feature: gene Location: 60557-62329 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60716-61334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60716-613 3 4 bp Feature: gene Location: 62550-62693 bp Feature: gene Location: 62885-63124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons