myRT

myRT report for GCA_005391265.1_ASM539126v1

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Seq: BFYK01000088.1 (2089 bp)
Overview 1 RT 1: 287-2084 bp Neighborhood of RT #1 [287, 2086] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 287-427 bp Feature: gene Location: 449-2086 bp Feature: domain Description: RVT_N Location: 506-743 bp Feature: domain Description: RVT_N Location: 506-743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1 442 bp Feature: domain Description: YkfC Location: 1574-1730 bp Feature: domain Description: YkfC Location: 1 574-1 730 bp Feature: domain Description: HNHc Note: nucleases Location: 1958-2084 bp Feature: domain Description: HNHc Note: nucleases Location: 1 958-2084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: BFYK01000051.1 (159003 bp)
Overview 1 RT 1: 96112-101477 bp Neighborhood of RT #1 [96112, 101512] RVT-UG7 PRK09692 proA Feature: gene Location: 96112-96252 bp Feature: gene Location: 96362-97102 bp Feature: gene Location: 97099-98727 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 97507-97936 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 97507-97936 bp Feature: gene Location: 98720-99904 bp Feature: domain Description: PRK09692 Location: 98726-99881 bp Feature: domain Description: PRK09692 Location: 9872 6-99881 bp Feature: gene Location: 100259-101512 bp Feature: domain Description: proA Location: 100286-101477 bp Feature: domain Description: proA Location: 1002 86-101477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: BFYK01000010.1 (14433 bp)
Overview 1 RT 1: 3927-7092 bp Neighborhood of RT #1 [3927, 7103] HlyC YkfC RVT-GII PHA02517 Feature: gene Location: 3927-4433 bp Feature: domain Description: HlyC Location: 3948-4308 bp Feature: domain Description: HlyC Location: 3 948-43 08 bp Feature: gene Location: 4514-5530 bp Feature: domain Description: YkfC Location: 5210-5480 bp Feature: domain Description: YkfC Location: 5210-5480 bp Feature: gene Location: 5391-6203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5484-6063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5484-6063 bp Feature: gene Location: 6376-6561 bp Feature: gene Location: 6684-7103 bp Feature: domain Description: PHA02517 Location: 6687-7092 bp Feature: domain Description: PHA02517 Location: 6687-7092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HlyC (pfam02794), YkfC (COG3344), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)