myRT

myRT report for GCA_005391605.1_ASM539160v1

Download annotations/find similar RTs

Seq: BFZB01000539.1 (1178 bp)
Overview 1 RT 1: 1-944 bp Neighborhood of RT #1 [1, 1084] YkfC RVT-GII Feature: gene Location: 1-411 bp Feature: domain Description: YkfC Location: 91-361 bp Feature: domain Description: YkfC Location: 91 -361 bp Feature: gene Location: 473-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 503-944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII

Seq: BFZB01000617.1 (2494 bp)
Overview 1 RT 1: 90-2467 bp Neighborhood of RT #1 [90, 2493] RVT-UG7 INT_P4_C Feature: gene Location: 90-1718 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 498-927 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 498-92 7 bp Feature: gene Location: 1711-2493 bp Feature: domain Description: INT_P4_C Location: 1936-2467 bp Feature: domain Description: INT_P4_C Location: 1936-2 467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, INT_P4_C (cd00801)

Seq: BFZB01000661.1 (769 bp)
Overview 1 RT 1: 2-731 bp Neighborhood of RT #1 [2, 766] RVT-GII GIIM HNHc Feature: gene Location: 2-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-56 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-56 bp Feature: domain Description: GIIM Note: maturase Location: 110-341 bp Feature: domain Description: GIIM Note: maturase Location: 110-3 41 bp Feature: domain Description: HNHc Note: nucleases Location: 572-731 bp Feature: domain Description: HNHc Note: nucleases Location: 572-73 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BFZB01000658.1 (83664 bp)
Overview 1 RT 1: 63502-67139 bp Neighborhood of RT #1 [63502, 67139] DUF1281 DUF1281_C RVT_N RVT-GII GIIM HNHc Feature: gene Location: 63502-64428 bp Feature: domain Description: DUF1281 Location: 63595-64123 bp Feature: domain Description: DUF1281 Location: 63595-64 123 bp Feature: domain Description: DUF1281_C Location: 64129-64369 bp Feature: domain Description: DUF1281_C Location: 64 129-64 369 bp Feature: gene Location: 64432-64605 bp Feature: gene Location: 64966-66666 bp Feature: domain Description: RVT_N Location: 65020-65263 bp Feature: domain Description: RVT_N Location: 65020-65263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65308-65944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65308-6594 4 bp Feature: domain Description: GIIM Note: maturase Location: 65995-66229 bp Feature: domain Description: GIIM Note: maturase Location: 65995-66229 bp Feature: domain Description: HNHc Note: nucleases Location: 66460-66610 bp Feature: domain Description: HNHc Note: nucleases Location: 664 60-66610 bp Feature: gene Location: 66703-66831 bp Feature: gene Location: 66882-67139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BFZB01000140.1 (975 bp)
Overview 1 RT 1: 1-961 bp Neighborhood of RT #1 [1, 972] RVT_N RVT-GII Feature: gene Location: 1-156 bp Feature: gene Location: 178-972 bp Feature: domain Description: RVT_N Location: 235-472 bp Feature: domain Description: RVT_N Location: 235 -472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523-961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 23-961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: BFZB01000213.1 (12898 bp)
Overview 1 RT 1: 10096-12895 bp Neighborhood of RT #1 [10096, 12895] RVT-UG4 Feature: gene Location: 10096-10371 bp Feature: gene Location: 11014-11193 bp Feature: gene Location: 11262-12587 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11613-12057 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116 13-12057 bp Feature: gene Location: 12650-12895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4