myRT

myRT report for GCA_005391745.1_ASM539174v1

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Seq: BFZI01000010.1 (7593 bp)
Overview 1 RT 1: 2397-7457 bp Neighborhood of RT #1 [2397, 7457] PRK15223 AfaD-like RVT-UG4 Feature: gene Location: 2397-5012 bp Feature: domain Description: PRK15223 Location: 2475-5007 bp Feature: domain Description: PRK1 5223 Location: 2475-5007 bp Feature: gene Location: 5027-5479 bp Feature: domain Description: AfaD-like Location: 5114-5459 bp Feature: domain Description: AfaD-like Location: 51 1 4-5459 bp Feature: gene Location: 5641-6360 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5974-6355 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5974-6355 bp Feature: gene Location: 6482-6997 bp Feature: gene Location: 7233-7457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15223 (fimbrial biogenesis outer membrane usher protein), AfaD-like (cd18776), RVT-UG4

Seq: BFZI01000033.1 (11295 bp)
Overview 1 RT 1: 2735-7036 bp Neighborhood of RT #1 [2735, 7041] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 2735-3199 bp Feature: gene Location: 3312-3518 bp Feature: gene Location: 4196-6097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4463-5294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4463-52 94 bp Feature: domain Description: Intron_maturas2 Location: 5408-5666 bp Feature: domain Description: Intron_maturas2 Location: 5408-5666 bp Feature: domain Description: HNHc Note: nucleases Location: 5840-6002 bp Feature: domain Description: HNHc Note: nucleases Location: 5840-6002 bp Feature: gene Location: 6137-6745 bp Feature: domain Description: PRK13732 Location: 6245-6743 bp Feature: domain Description: PRK13732 Location: 62 45-6743 bp Feature: gene Location: 6808-7041 bp Feature: domain Description: DUF905 Location: 6838-7036 bp Feature: domain Description: DUF905 Location: 6838-7036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: BFZI01000019.1 (45031 bp)
Overview 1 RT 1: 33847-39672 bp Neighborhood of RT #1 [33847, 39689] proA PRK09692 RVT-UG7 Psu Feature: gene Location: 33847-35100 bp Feature: domain Description: proA Location: 33874-35065 bp Feature: domain Description: proA Location: 3 3 874-3 5065 bp Feature: gene Location: 35455-36639 bp Feature: domain Description: PRK09692 Location: 35461-36616 bp Feature: domain Description: PRK09692 Location: 3 5461-3 6616 bp Feature: gene Location: 36632-38260 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 37040-37469 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3 7040-3 7469 bp Feature: gene Location: 38257-38997 bp Feature: gene Location: 39300-39689 bp Feature: domain Description: Psu Location: 39303-39672 bp Feature: domain Description: Psu Location: 3 93 03 -3 9672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: BFZI01000099.1 (147066 bp)
Overview 1 RT 1: 125598-130799 bp Neighborhood of RT #1 [125598, 130799] met_A_Alw26 RVT-GII RVT-GII Feature: gene Location: 125598-127850 bp Feature: domain Description: met_A_Alw26 Location: 125925-127626 bp Feature: domain Description: met_A_Alw26 Location: 125925-127626 bp Feature: gene Location: 127916-128116 bp Feature: gene Location: 128928-129191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128934-129054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128934 -129054 bp Feature: gene Location: 129223-129363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129229-129343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129229-12934 3 bp Feature: gene Location: 129617-130054 bp Feature: gene Location: 130443-130799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT met_A_Alw26 (TIGR02987), RVT-GII